Ectopseudomonas hydrolytica: NLY38_18515
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Entry
NLY38_18515 CDS
T08519
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NLY38_18515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phf02000
]
NLY38_18515
Transporters [BR:
phf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NLY38_18515
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
AAA_22
AAA_23
ABC_ATPase
RsgA_GTPase
AAA_16
nSTAND1
AAA_29
AAA_25
NACHT
AAA
Rad17
nSTAND3
AAA_5
nSTAND_NTPase5
NB-ARC
ATPase_2
ORC-CDC6-like
ATP-synt_ab
AAA_28
Motif
Other DBs
NCBI-ProteinID:
UTH30417
LinkDB
All DBs
Position
3946615..3947601
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AA seq
328 aa
AA seq
DB search
MSYLNIRGLHKSYGATPIFTDINIEIGQGQFITLLGPSGCGKSTLLRCIAGLTAVDGGQI
LLDGEDLVPMPPQKRGIGMVFQSYALFPNMTVQQNVAFGLRMQKVPGAEASKRVAEVLEL
VELSDYANRYPQQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRAIQ
RELGLTTIFVTHDQEEALVLSDRIVLMNGGQIVQSGDAETLYTAPADAFAAGFIGNYNLL
DAEAASRLLGQPIGSRVAIRPEAIHFADGGIEAQIRSHSLLGNVIRYRVEARGVELLVDV
LNRSAADLHHDGQSVSLAIGADAIREVA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagttacctgaatatccgcggcctgcataaaagctacggcgcaacgcccatcttcacc
gacatcaacatcgagatcggccagggtcagttcatcaccctgctcggcccctccggctgc
ggcaagtccaccctgctgcgctgcatcgccggcctgaccgcggtcgacggcgggcagatc
ctgctggacggcgaggacctggtgcccatgccgccgcagaaacgcggcatcggcatggtg
ttccagagctatgcgctgttccccaacatgaccgtgcaacagaacgtcgccttcggcctg
cgcatgcagaaggtccccggcgccgaggccagcaagcgcgtcgccgaggtgctggagctg
gtggagctcagcgactacgccaatcgttacccgcaacagctctccggcggtcagtgccaa
cgggtggccctggcccgttcgctggtcacccgcccgcgcctgctgctgctcgacgaaccg
ctgtcggcgctggacgcgcgcatccgcaagcacctgcgcgaacagatccgcgccatccag
cgcgagctgggcctgaccaccatcttcgtcacccacgatcaggaagaagcgctggtgttg
tccgaccgcatcgtgctgatgaacggcgggcagatcgtccagagcggcgacgccgaaacc
ctctacactgcgccggccgatgccttcgccgccggttttatcggcaactacaacctgctc
gacgccgaggccgccagccgcctgctcggccagccgatcggcagccgcgtggcgattcgc
ccggaagccatccacttcgccgacggcggcatcgaggcgcagattcgcagccacagcctg
ctcggcaacgtgatccgctaccgcgtcgaagcgcgcggcgtggagctgctggtggacgtg
ctcaaccgctccgccgccgacctgcaccacgacggccagagcgtcagcctggccataggc
gccgatgcgatccgggaggtggcgtga
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