Ectopseudomonas hydrolytica: NLY38_18955
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Entry
NLY38_18955 CDS
T08519
Name
(GenBank) DEAD/DEAH box helicase
Organism
phf
Ectopseudomonas hydrolytica
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
SWIM
HDA2-3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UTH30502
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Position
4044468..4047098
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AA seq
876 aa
AA seq
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MPLDIHQLRQEDWRSEFGAGDLRRGLAYAEEKRSKLLSLKDNSLLANCRGSGLQTYQQRI
TLHPYGRKWSVTGHCNCPVGFNCKHVVAALLTLEAQQRAGSDLSEIMVPTREMAEQRLEG
IAPTAVLSLGSQVRVHFDARKGRMQEQTQHRAALAFDYAGHRVFGKPAKDLVKRLDADTN
LRLIRDAAAEAALRKRLESLGLQVALRQSEALPAEAGEPFELERERDWLDFVQQQLPQLR
AEGWQIHMRPDFQYNLAEVDDWYAEVEEDPQQNWFDLELGIEVEGQRLSLLPILLQAIRR
TPWLLAPEALAQRTDEDRLLVSLPQGGKRIALPFARLKPLLATLGELYFRDPGEDHLPLR
LGRADAARLAELASGPALSWQGGDELRGFAQRLQQLSVREVAPPQGMRAELRPYQLQGLT
WMQTLAELRVGGVLADDMGLGKTLQTLAHILCEKQAGRLDKPALIVMPTSLIPNWQDEAA
RFTPQLRVLALHGAKRKAAFEDIAAHDLILTTYALLPRDLKALNRHAYRLLILDEAQNIK
NPRSKAATAAAQVRADLRLCLTGTPLENHLGELWSLFHFLMPGWLGDAKAFTRDYRTPIE
KRGDAQRLGHLNGRIRPFLLRRNKEQVASELPPKTEITQWVELTQLQRDRYETLRLAMDQ
KVRDEIARQGLARSHIVILEALLRLRQSCCDLRLLGDAGSQLTAADSGKLSALLDMLEEL
VDEGRRVLLFSQFTSMLALIEAELQARKIAYAKLTGSTQDRRTPVARFQAGEFPVFLISL
KAGGSGLNLTAADTVIHFDPWWNPAAEAQASDRAYRIGQDKPVFVYKLITRGSVEEKIQQ
LQQAKASLARGVLEGGSQGQWQLDEADLAALFAPLD
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcccctggatatccatcagttgcgtcaggaggactggcgctcagagttcggcgccggc
gacctgcgtcgcggcctcgcctatgccgaggaaaaacgcagcaaactgctcagcctcaag
gacaacagcctgctggccaactgtcgcggctctggcctgcagacctaccagcagcgcatc
accctgcacccctacggccgcaagtggagcgtcaccggccactgcaactgcccggtgggc
ttcaactgcaagcacgtggtcgccgccctgctcaccctggaggcgcagcagcgtgccggc
agcgatctttccgaaatcatggtgccgacccgggagatggccgagcagcgcctcgaaggc
atcgcccccaccgcggtcctgagcctcggcagccaggtacgggtgcacttcgatgcgcgc
aaggggcgaatgcaggagcagacccaacaccgcgccgcgctggccttcgactatgccggg
catcgcgtcttcggcaaaccggccaaggacctggtcaagcgcctggacgccgacaccaac
ctgcgcctgatccgtgacgcagcggcggaagccgcgctgcgcaaacgcctggaaagcctg
ggcctgcaggtggcgctacggcagagcgaggcgctgcccgccgaagctggcgagccgttc
gagctggaacgcgagcgcgactggctggacttcgtccagcagcagttgccacagctgcgc
gccgagggctggcagatccacatgcgtccggactttcagtacaacctggccgaggtggac
gactggtatgccgaggtcgaggaagacccgcagcagaactggttcgatctggaactgggc
atcgaagtcgaaggtcagcgcctgagcctgctgccgatcctgctccaggccattcgccgc
actccctggttgctggcgcccgaggcgctggcccagcgcaccgacgaggatcgcctgctg
gtcagcctgccgcagggcggcaagcgcatcgccctgcccttcgcccgcttgaagcccctg
ctggccaccctcggcgagctgtatttccgcgatcccggcgaggaccacctgccactgcgc
ctgggccgggccgatgccgcgcgcctggccgagctggccagcggcccggccctgagctgg
cagggtggcgacgagctgcgcggtttcgcccagcgcctgcagcagctgtcggtcagagag
gttgcgccaccccagggaatgcgcgccgagctgcggccctatcagttgcagggcctgacc
tggatgcagaccctggccgagctgcgcgtcggcggcgtgctggccgacgacatgggcctg
ggcaagaccctgcagaccctggcgcatatcctctgcgagaaacaggcgggtcgtctcgac
aagcccgcgctgatcgtcatgcctaccagcctgattcccaactggcaggacgaggccgcg
cgcttcaccccgcagctgcgggtgctggccctgcatggcgccaaacgcaaggccgcgttc
gaggacatcgccgcgcacgacctgatcctcaccacctatgccctgctgccacgcgacctc
aaggccctgaaccggcacgcctatcggctgctgatcctcgacgaggcgcagaacatcaag
aacccgcgcagcaaggccgccaccgccgccgcccaggtgcgcgccgatctgcgcctgtgc
ctgaccggtacgccgctggagaatcacctgggcgagctgtggtcgctgttccatttcctc
atgcccggctggctgggcgatgccaaggccttcacccgcgattaccgcacgcccatcgag
aaacgcggcgacgcccagcgcctgggtcacctcaatgggcgcatccgtcccttcctgctg
cgccgcaacaaggaacaggtggccagcgaactgccgccgaagaccgagatcacccagtgg
gtcgagctgacccagctgcaacgcgaccgctacgagaccctgcgcctggccatggaccag
aaggtgcgcgacgagatcgcccgccagggcctggcacgcagccatatcgtcatcctcgaa
gccctgctgcgcctgcgccagagctgctgcgacctgcgcctgctgggcgatgccggcagc
cagctgaccgccgccgattcgggcaagctcagcgccctgctggacatgctcgaagagctg
gtggacgaaggccgccgcgtgctgctgttctcccagttcacctcgatgctggcgctgatc
gaggcggagctgcaggcgcgcaagatcgcctacgccaagctcaccggcagcacccaggac
cggcgcacaccggtcgcgcgcttccaggccggtgaattcccggtattcctgatcagcctc
aaggccggcggcagcggcctgaacctgaccgcggccgacaccgtgatccacttcgacccc
tggtggaacccggccgccgaagcccaggccagcgaccgcgcctatcgcatcggccaggac
aagccggtgttcgtctacaagctaatcacccgcggcagcgtcgaggaaaagatccagcag
ctgcagcaggccaaggccagcctggccaggggcgtgctggaaggcggcagccagggccag
tggcagctggacgaggccgacctggcggcgctgttcgcgccgctcgactga
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