Pseudomonas hydrolytica: NLY38_20150
Help
Entry
NLY38_20150 CDS
T08519
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
phf
Pseudomonas hydrolytica
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phf03400
]
NLY38_20150
DNA repair and recombination proteins [BR:
phf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NLY38_20150
Archaeal homologous recombinant proteins
NLY38_20150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
AAA_29
ABC_tran
AAA_21
cobW
nSTAND3
AAA
AAA_15
RsgA_GTPase
NTPase_1
AAA_22
MobB
Motif
Other DBs
NCBI-ProteinID:
UTH30731
LinkDB
All DBs
Position
complement(4286689..4290123)
Genome browser
AA seq
1144 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFAAEPFAGSGLFAITGPTGAGKTTLLDAICLALYHRTPR
MSTLSTSGNELMTRHTADCLAEVEFEVKGQGYRAFWSQRRARDKVEGALQAPKVELARIA
DGEILTDKIREKEHLTAELTGLDFERFTKSMLLAQGGFAAFLEANANQRAELLEELTGTE
VYGLISQQVYERTKASEQALNLLKSRAQGMELLDEAQRVELQAEHQRLNQEEAPLLAQQQ
ALQGQRRWREALQQAEQQCERARLGLEQAQQARNEAAGELQRLAASEPAARLQPLYQSWQ
QLQQDRQQAQQVLDDLQAQQRHSSEREHQQLWLASRYARQCLSLHQSEQQRLTEQRETLQ
ARLRATPQRARLGELLGGWRAQFDQRGQLLMRQQTLRAGIAQEREQLAALQRQRDQLAAQ
QTDAATRLEQAQAREAEQHRELQALLGADDEAGLRQRWQQLQVQGRALDRLEQLAQSREQ
TAEQIAELTPRLAQLQTQHAAKNDEITALRERYKVLKQQVADKEKLLEQEQRIQDLEAYR
AQLQPGEACPLCGSHEHPAVSQYQALDVSATRQALEQCRSDLARLESQGGTLRDELTRLA
TQIAQLQQQLEQAQQRVAQQDAQWQQQLAEQALQIADGAALRQLQREHEQHLGQLQQRLA
QVETRQAELTQARSAREIAERALADMQQRLALLARDEENLQARQREQNERLQGLEQELRH
HDQALLASLEGFASELPAHAGNWLAEQASAWRDWQQAQAHDQQLQEQLRESQRLLAEAEA
RAEQWQQRWQAEQAQALIEPEPVAQPEQALQGAIDSLASAQRESDALRGRQQSQQSLLQQ
LQQRLSEAEQRWQQALAASPFTDLQAFLAALLDEHERERLTSLQARLQQALTEATTLLAA
ADAQWQQLGTTPQTELTLAELDEQLQALQLTLRELSQRQGELRAQLQADDARRSSQQALF
AEIGAQESEHALWQQLNGLIGSADGAKFRKFAQGLTLDHLVHLANRQLTRLHGRYQLARK
SSGELELEVCDTWQADVARDCRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFG
TLDGETLEVALDALDNLNASGKTIGVISHVEAMKERIPVQLRVHKGVGLGYSRLDARFAV
KEGA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgcgcctcaagaacctcaactcgctcaagggcgaatggaagatc
gattttgctgccgagcccttcgccggcagcggcctgttcgccatcaccgggccgacgggc
gcgggcaagaccacgctgctcgatgccatctgcctggccctgtaccaccgcacaccgcga
atgagcacgctgtcgaccagcggcaacgagctgatgacccggcacaccgccgactgcctg
gccgaggtggaattcgaggtgaaagggcagggctatcgcgccttctggagccagcgccgc
gcgcgggacaaggtcgaaggcgcgctgcaggcgcccaaggtcgagctggcgcgcattgcc
gacggtgaaatcctcaccgacaagattcgcgagaaggaacatctcaccgccgaactgacc
ggcctggacttcgagcgtttcaccaaatccatgctgctggcccagggcggcttcgcggcc
ttcctcgaggccaacgccaaccagcgcgccgagctgctggaggaactgaccggcaccgag
gtgtacggactgatctcgcagcaggtctacgagcgcaccaaggcgtcggagcaggcgctg
aatctgctgaaaagccgcgctcagggcatggagctcctggacgaggcgcagcgcgtcgaa
ttgcaggccgagcatcagcgcctgaaccaggaggaggcgccgctgttggcgcagcaacag
gccctgcaaggccaacgccgctggcgtgaagccctgcaacaggccgagcagcaatgcgag
cgcgcgcggctgggactggagcaggcgcagcaggcgcgcaacgaggcggccggcgagctg
cagcgtctggccgccagtgaaccggccgctcgcctgcagccgttgtatcagagctggcag
cagttgcagcaggatcgacagcaggcgcagcaggtgctggacgacctgcaggcgcagcag
cgccacagcagcgagcgcgaacatcagcaactctggctggccagccgctatgcccggcag
tgcctgagcctgcaccagagcgaacagcagcgtctgaccgagcagcgtgaaacgctgcaa
gcgcgtttgagggctaccccgcaacgtgcccgcctgggcgagttgcttggcggctggcgc
gcgcagtttgatcagcgcgggcaactgctcatgcggcagcagacgctgcgtgcgggcatc
gcgcaggagcgcgagcagctcgctgccttgcaacggcagcgtgatcagcttgccgcgcaa
cagacggacgcggcgacgcggctggagcaggcgcaggcccgcgaagccgaacagcaccgc
gagctgcaggcgttgctcggcgcggacgacgaggccgggctgcggcagcgctggcagcag
ctgcaggtgcagggaagggcgctggatcgcctggaacaactggcgcagagccgcgagcag
acggccgaacagatcgccgagctgaccccgcgcctggcgcagctgcaaacgcagcatgcc
gccaagaacgatgaaatcaccgccctgcgcgagcgctacaaagtgctcaagcagcaggtt
gccgacaaggaaaagctgctggagcaggagcagcgcattcaggatctggaagcctatcgt
gcccagctgcagccgggcgaagcctgcccattgtgcggctcgcacgagcatccggcggtc
agccagtaccaggcgctggatgtctccgccacgcgccaggcgctggaacagtgccgcagc
gatctggcgcggctggaaagccagggcggcaccctgcgcgacgaactgacccgtctggcc
acgcagatcgcccagctgcagcagcaactggaacaggcacaacagcgcgtcgcccaacag
gacgcgcagtggcagcagcaactggccgagcaggccctgcagatcgccgatggtgcagcg
ctgcgtcagttgcagcgtgagcatgagcagcatctggggcagctgcagcagcgtctcgcc
caggtcgaaacccgtcaggccgagctgacgcaggcgcgcagcgcccgcgagattgccgag
cgtgccctggccgatatgcagcaacgcctggcgctgctggcgcgcgatgaagaaaacctg
caggcgcgtcaacgcgaacagaacgagcgtctgcaggggctggagcaggaactgcggcat
cacgatcaggcattgctggccagcctcgagggctttgcctcggagttgccggcgcacgcc
ggcaactggctggccgagcaggcgagtgcctggcgcgactggcagcaggcccaggcgcac
gaccagcagctgcaggagcagttgcgcgaaagccagcgtctgctcgccgaagccgaggcc
cgggccgagcaatggcaacagcgctggcaggccgaacaggcccaggcgctgatcgagccc
gagccagtggcgcagcccgagcaggccctgcaaggtgccatcgacagcctggccagcgcg
cagcgcgaaagcgatgccctgcgtggccggcagcagagccagcagagcctgctgcagcaa
ttgcagcagcgcctgagcgaagccgagcagcgctggcagcaggcgctggcggccagcccc
ttcactgacctgcaggcatttctcgccgcgctgctggacgagcacgaacgcgagcgtctg
acgagtttgcaggcgcgtctgcagcaagcccttaccgaggccacgacgctgctggctgcc
gccgacgcgcaatggcagcaactgggtaccacgccgcagaccgagctgacgctggccgag
ctggacgagcagctgcaggcgctgcagctgaccttgcgcgagctgagccagcgccagggc
gagctgcgcgcccagttgcaggcggacgatgcgcggcgcagcagccagcaggcgctgttc
gccgagatcggagcacaggagagcgagcatgcgttgtggcagcagctcaacggcctgatc
ggttcggccgatggcgccaagttccgcaagttcgcccagggcctgaccctcgatcacctg
gtccatctggccaaccgccaactgacgcgcctgcacggccgctaccagctggcgcgcaag
agcagcggcgaactggagctggaggtgtgcgacacctggcaggccgacgtggcgcgcgac
tgccgcacgctgtccggtggcgagagcttcctggtcagcctggcgttggccctggcgctg
tcggatctggtcagccacaagaccagcatcgactcactgtttctcgacgaaggcttcggt
accctggatggcgaaaccctggaggtggcgctcgatgccctggacaacctcaacgccagc
ggcaagaccatcggcgtgatcagtcacgtcgaggcgatgaaagaacgcattcccgtgcag
ctgcgggtgcacaagggcgtcggcctcggctacagccggctcgacgcacgttttgcggtg
aaggaaggagcgtag
DBGET
integrated database retrieval system
