Ectopseudomonas hydrolytica: NLY38_20170
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Entry
NLY38_20170 CDS
T08519
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
phf
Ectopseudomonas hydrolytica
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phf03400
]
NLY38_20170 (sbcD)
DNA repair and recombination proteins [BR:
phf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NLY38_20170 (sbcD)
Archaeal homologous recombinant proteins
NLY38_20170 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FliT
Motif
Other DBs
NCBI-ProteinID:
UTH30735
LinkDB
All DBs
Position
complement(4293419..4294633)
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AA seq
404 aa
AA seq
DB search
MRILHTSDWHLGQHFMGKTRQAEHQAFCAWLLEQVRSHAVDVLLIAGDVFDTGAPPSYAR
EQYYRQVVELRDAGCALVVLGGNHDSPAMLGESRSLLAQLGTQVVPGVGVDLAEQVRVLH
DREGVPGAILCAVPFIRPRDVTASQAGQSAQDKQQSLQQAIAEHYRALHELAQHQRDELG
LALPIIATGHLTTVGASASESVREIYVGSLEAFPTSAFPPADYIALGHIHRPQKVGGLEH
IRYSGSPIALSFDEARQQKEVLLLTFGDGSLQSITPLPVPVFQPMASLCGSLKELAGAIA
EQAAQGMPERPVWLEVQVSSDDYLSDLQSRINALCEGLPVEVLRIRRERGTASASLASEA
RETLDELSVEDVFSRRLQQEALDEDDSRRLQGLYRQVLETLPRA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctgcacacctccgactggcatctgggccagcacttcatgggcaagacccgc
caggccgagcatcaggccttctgcgcctggctgctggagcaggtccgcagccatgccgtg
gatgtgctgctgatcgccggcgacgtgttcgacaccggtgcgccgcccagctatgcccgt
gagcagtactaccgccaggtggtggagctgcgcgacgccggttgcgcgctggtggtactc
ggcggcaatcacgactcgccggccatgctcggcgagagccgcagcctgctggcgcaactg
ggtacccaggtggtgccgggtgtcggtgtcgatctcgccgagcaggtgcgagtgctgcat
gaccgcgagggtgtgcctggcgccattctctgcgcggtacccttcatccgcccgcgtgat
gtaacggccagtcaggccgggcagagtgcgcaggacaagcagcagtcgctgcagcaggcc
atcgccgagcactaccgagcccttcacgagctggcgcagcaccagcgcgacgagctgggc
ctggcgctgccgatcatcgccaccgggcacctcaccaccgtgggcgccagtgccagcgag
tcggtgcgggaaatctacgtcggcagcctggaggccttccccaccagcgccttcccgccc
gccgattacatcgccctcggtcatatccacaggccgcagaaggtcggcggcctggagcac
attcgctacagcggctcgcccatcgcgctgtccttcgatgaagcgcggcagcagaaggaa
gtgctactcctgaccttcggcgatggctcgctgcaatcgatcacccccttgccggtgccg
gtgtttcagcccatggccagtctgtgcggctcgctcaaggaactggccggcgccatcgcc
gaacaggccgcccagggcatgcccgagcggcctgtgtggctcgaggtacaggtcagcagc
gacgattacctgagtgatctgcaaagccgcatcaacgccctgtgcgaggggctgcctgtc
gaagtgctacgcattcgccgcgagcgcggcacggccagcgcgagtctcgccagcgaagca
cgggaaaccctggatgagctgtcggtggaggacgtcttctcacgcaggctgcaacaggaa
gcgctggatgaggacgatagccggcgcttgcagggactgtatcggcaggtgctggaaacg
ctgccaagagcctag
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