Ectopseudomonas hydrolytica: NLY38_20410
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Entry
NLY38_20410 CDS
T08519
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLY38_20410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phf03019
]
NLY38_20410
Enzymes [BR:
phf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NLY38_20410
Messenger RNA biogenesis [BR:
phf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NLY38_20410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UTH30783
LinkDB
All DBs
Position
4346428..4347819
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AA seq
463 aa
AA seq
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MLKKLFTSFRSPLRRAPRPRSTPEVLSSRQHPINRNEISRHAISVVERLQKAGYQAYLVG
GCVRDLLLDIDPKDFDVATSATPEQVRAEFRNARVIGRRFKLVHVHFGREIIEVATFRAN
HPQGEEEENSNQAARHESGRILRDNVYGTLEDDAQRRDFTINALYYDPTQEHILDYARGM
HDVRNHLVRLIGDPEQRYLEDPVRMLRAVRFAAKLDFDIEKHSAAPIRRLAPMLRDIPAA
RLFDEVLKLFLAGYAEYTFDLLLEHDLFAQLFPASGEALKRNPEYTEKLIREALINTDDR
IHDGKSVTPAFLFAALLWPALPARVLHLQSKGMPPIPAMQEAAHELITEQCQRIAVPKRF
TIPIREIWDMQERLPRRSGKRADLLLENPRFRAGYDFLLLRERAGEDTEGLGDWWTDYQE
ASDSQRRQMIRDLAGKPEAAGSAPRKRRRSGGKRKRGGESSGE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgtttacgtcttttcgctcgcccctgcgccgcgcgccacgtcctcgc
agcacgcccgaagtgctgagcagccgtcaacacccgatcaatcgcaacgagatcagccgt
cacgccatcagcgtggtcgagcgcttgcagaaggccggttatcaggcctatctggtcggc
ggctgcgtgcgtgacctgctgttggacatcgaccccaaggacttcgacgtggccaccagc
gccacgcccgagcaggtgcgcgccgagtttcgcaacgcccgcgtcatcggtcgccggttc
aagctggttcatgtgcacttcggccgcgagatcatcgaagtggccaccttccgcgccaac
catccgcaaggcgaggaagaggagaacagcaaccaggccgcgcgccacgaaagcgggcgc
atcctgcgcgacaacgtctacggcaccctggaggacgacgcccagcgtcgcgacttcacc
atcaatgcgctgtactacgacccgacgcaggagcacatcctcgattacgcccgcggcatg
catgacgtgcgcaatcacctggtacgcctgatcggtgacccggaacagcgctacctggaa
gacccggtgcgcatgctgcgtgcggtgcgcttcgccgccaagctggacttcgacatcgag
aagcacagcgccgcgccgatccgccgcctggccccgatgctgcgcgacatcccggcagcg
cgtctgttcgatgaggtgctcaagctgttcctggccggttacgccgagtacaccttcgat
ctgctgctcgaacacgacctgttcgcccagctgttcccggccagcggcgaggcgctcaag
cgcaatcccgagtacaccgagaagctgatccgcgaagcgctgatcaacaccgatgaccgt
atccacgacggcaagtcggtcaccccggccttcctcttcgccgccctgctctggccagcc
ctgccggcccgtgtgctgcatctgcaaagcaagggcatgccgccgattccggcgatgcag
gaagcggcccacgagctgatcaccgagcagtgccagcgcattgccgtacccaagcgcttc
accattcccatccgcgaaatctgggacatgcaggagcgcctgccgcgacgtagcggcaag
cgtgccgacctgctgctggaaaacccgcgctttcgcgcaggttatgacttcctgctgctg
cgtgagcgcgctggcgaagacaccgaaggcctgggcgactggtggaccgactatcaggaa
gccagcgacagccagcgtcggcagatgatccgcgatctggccggcaaacctgaggcggca
ggcagtgcaccgcgcaaacgccgccgcagcggcggcaaacgcaagcgcggcggtgagagc
agcggcgaatga
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