KEGG   Ectopseudomonas hydrolytica: NLY38_20410
Entry
NLY38_20410       CDS       T08519                                 
Name
(GenBank) polynucleotide adenylyltransferase PcnB
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
phf  Ectopseudomonas hydrolytica
Pathway
phf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:phf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NLY38_20410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phf03019]
    NLY38_20410
Enzymes [BR:phf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     NLY38_20410
Messenger RNA biogenesis [BR:phf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     NLY38_20410
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: UTH30783
LinkDB
Position
4346428..4347819
AA seq 463 aa
MLKKLFTSFRSPLRRAPRPRSTPEVLSSRQHPINRNEISRHAISVVERLQKAGYQAYLVG
GCVRDLLLDIDPKDFDVATSATPEQVRAEFRNARVIGRRFKLVHVHFGREIIEVATFRAN
HPQGEEEENSNQAARHESGRILRDNVYGTLEDDAQRRDFTINALYYDPTQEHILDYARGM
HDVRNHLVRLIGDPEQRYLEDPVRMLRAVRFAAKLDFDIEKHSAAPIRRLAPMLRDIPAA
RLFDEVLKLFLAGYAEYTFDLLLEHDLFAQLFPASGEALKRNPEYTEKLIREALINTDDR
IHDGKSVTPAFLFAALLWPALPARVLHLQSKGMPPIPAMQEAAHELITEQCQRIAVPKRF
TIPIREIWDMQERLPRRSGKRADLLLENPRFRAGYDFLLLRERAGEDTEGLGDWWTDYQE
ASDSQRRQMIRDLAGKPEAAGSAPRKRRRSGGKRKRGGESSGE
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgctgaagaagctgtttacgtcttttcgctcgcccctgcgccgcgcgccacgtcctcgc
agcacgcccgaagtgctgagcagccgtcaacacccgatcaatcgcaacgagatcagccgt
cacgccatcagcgtggtcgagcgcttgcagaaggccggttatcaggcctatctggtcggc
ggctgcgtgcgtgacctgctgttggacatcgaccccaaggacttcgacgtggccaccagc
gccacgcccgagcaggtgcgcgccgagtttcgcaacgcccgcgtcatcggtcgccggttc
aagctggttcatgtgcacttcggccgcgagatcatcgaagtggccaccttccgcgccaac
catccgcaaggcgaggaagaggagaacagcaaccaggccgcgcgccacgaaagcgggcgc
atcctgcgcgacaacgtctacggcaccctggaggacgacgcccagcgtcgcgacttcacc
atcaatgcgctgtactacgacccgacgcaggagcacatcctcgattacgcccgcggcatg
catgacgtgcgcaatcacctggtacgcctgatcggtgacccggaacagcgctacctggaa
gacccggtgcgcatgctgcgtgcggtgcgcttcgccgccaagctggacttcgacatcgag
aagcacagcgccgcgccgatccgccgcctggccccgatgctgcgcgacatcccggcagcg
cgtctgttcgatgaggtgctcaagctgttcctggccggttacgccgagtacaccttcgat
ctgctgctcgaacacgacctgttcgcccagctgttcccggccagcggcgaggcgctcaag
cgcaatcccgagtacaccgagaagctgatccgcgaagcgctgatcaacaccgatgaccgt
atccacgacggcaagtcggtcaccccggccttcctcttcgccgccctgctctggccagcc
ctgccggcccgtgtgctgcatctgcaaagcaagggcatgccgccgattccggcgatgcag
gaagcggcccacgagctgatcaccgagcagtgccagcgcattgccgtacccaagcgcttc
accattcccatccgcgaaatctgggacatgcaggagcgcctgccgcgacgtagcggcaag
cgtgccgacctgctgctggaaaacccgcgctttcgcgcaggttatgacttcctgctgctg
cgtgagcgcgctggcgaagacaccgaaggcctgggcgactggtggaccgactatcaggaa
gccagcgacagccagcgtcggcagatgatccgcgatctggccggcaaacctgaggcggca
ggcagtgcaccgcgcaaacgccgccgcagcggcggcaaacgcaagcgcggcggtgagagc
agcggcgaatga

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