Ectopseudomonas hydrolytica: NLY38_20490
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Entry
NLY38_20490 CDS
T08519
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phf
Ectopseudomonas hydrolytica
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phf03016
]
NLY38_20490 (truB)
Enzymes [BR:
phf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NLY38_20490 (truB)
Transfer RNA biogenesis [BR:
phf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NLY38_20490 (truB)
Prokaryotic type
NLY38_20490 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
UTH30799
LinkDB
All DBs
Position
complement(4365100..4366020)
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AA seq
306 aa
AA seq
DB search
MAQVKRIRRKVDGIILLDKPRGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETVAQLGMTTTTGDAEGEVLERRPVTVGRPEIEALLPRFRGEIK
QIPPMYSALKKDGQPLYKLARAGEVVEREARSVTIARLELLAFEGEQARLSVDCSKGTYI
RTLVEDLGQLLGCGAHVAELRRTKAGPFELARTVTLEELEAVHAEGGSEALDRFLQPVDS
GLQNWPLLQFSEHSAFYWLQGQPVRAPEAPKFGMVRVQDHNGRFIGIGEVSDDGRIAPRR
LIYTGA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggtcaaacgtattcgccgcaaggtcgacggcatcatcctgctggacaagccg
cgcggctttacctccaacgcggccctgcagaaggtgcgctggctgctcaatgccgagaag
gccgggcataccggcagcctcgatccgctggcaaccggcgtgctgccgctgtgtttcggc
gaggcgaccaagttttcccagtacctgctcgatgccgacaagggctacgagaccgtggcg
caactgggcatgaccaccaccaccggcgacgccgaaggtgaggtgctcgagcgacgcccg
gtgaccgttggtcgccctgaaatcgaggccctgttgccgcgttttcgtggagaaatcaaa
cagatacctccaatgtattcggccctgaagaaggacggccagccgctgtacaagctggcc
cgtgcaggcgaagtagtggagcgcgaagcgcgttctgttactattgcgcgcctggaattg
ctggccttcgaaggcgagcaggcgcgtctgtccgtggactgcagcaaggggacctacatt
cgtaccctggtcgaggacctcggccaattgctcggttgtggcgcacacgtcgccgagctg
cgtcgaaccaaggccggtcccttcgagctggcacgtaccgtgactctggaagagctggaa
gcggtgcacgccgaaggtggcagcgaagcgctcgatcgcttcctgcagccggtcgacagc
ggtttgcagaattggccgctgctgcagttttccgagcacagcgcgttctactggttgcag
gggcaaccggtacgggcaccggaagcgccgaagttcggcatggtgcgcgtgcaggatcac
aatggtcgcttcatcggcatcggtgaagtgagcgacgacgggcgcatcgccccgcgtcga
ttgatttataccggtgcgtag
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