Ectopseudomonas hydrolytica: NLY38_20570
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Entry
NLY38_20570 CDS
T08519
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf00220
Arginine biosynthesis
phf00240
Pyrimidine metabolism
phf00250
Alanine, aspartate and glutamate metabolism
phf01100
Metabolic pathways
phf01110
Biosynthesis of secondary metabolites
phf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NLY38_20570 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NLY38_20570 (carB)
00220 Arginine biosynthesis
NLY38_20570 (carB)
Enzymes [BR:
phf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NLY38_20570 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
UTH30813
LinkDB
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Position
complement(4379036..4382257)
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AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAM
ADATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANA
DTIDKAEDRSRFDKAMKDIGLACPRSGIAHSMEEAYGVLEMVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKVP
RFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGVAGFDPKLDLNDPEA
ESTLRRELTVPSADRIWYVADAFRAGKTVAEVFELTRIDEWFLVQIEDLVKDEEKVKTLG
LSAIDYDLMFKLKRKGFSDARLAKLLGVSEKSLRAHRHKLKVLPVYKRVDTCAAEFATDT
AYMYSTYEEECEANPSSRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKICRALEEAGVPI
IGTSPEAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALALSKGIGYPMVVRPSYVLG
GRAMEIVYQEEELKRYMREAVKVSNDSPVLLDRFLNCAIEVDVDAVSDGETVVIGAIMQH
IEQAGVHSGDSACSLPPYSLPAHIQDEIREQVKKMALELGVVGLMNVQMAVQGEDIYVIE
VNPRASRTVPFVSKCVGESLAKVAARVMAGKTLAEVGYTKEIIPPFFSVKEAVFPFAKFP
GVDPILGPEMKSTGEVMGVGDSFGEAFAKAQLGASEILPNSGCAFISVREDDKAEAVQVA
RDLVSLGFEVVATAGTAKVIEAAGLPVRRVNKVTEGRPHVVDMIKNDEVTLIINTTEGRQ
SIADSYSIRRNALQHKIYCTTTIAAGQAVCEALKFGPEKTVRRLQDLHAGIKA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacatcaaaagcatcctgatcctcggcgccggccccatcgtcatc
ggccaggcctgcgagttcgactactccggcgcccaggcgtgcaaggcgctgaaggaagaa
ggtttccgcgtcatcctggtgaactccaacccggccaccatcatgaccgacccggccatg
gccgacgccacctacatcgagccgatcaagtgggccaccgtggccaagatcatcgagaag
gagcgtccggacgcgctgctgccgaccatgggcggccagaccgcgctgaactgcgccctg
gacctagagcgccacggcgtgctggaaaagttcggcgtcgagatgatcggtgccaacgcc
gacaccatcgacaaggccgaagaccgctcgcgcttcgacaaggcgatgaaggacatcggc
ctggcctgcccgcgttcgggtatcgcccacagcatggaagaagcctacggcgtgctggag
atggtgggcttcccctgcatcatccgccccagcttcaccatgggcggcaccggcggcggc
atcgcctacaaccgtgaagaattcgaggaaatctgcgcccgcggtctggacctgtcgccg
accaacgagctgctgatcgacgaatcactgatcggctggaaggaatacgagatggaggtg
gtccgcgacaagaaggacaactgcatcatcgtctgctccatcgagaacttcgacccgatg
ggcgtgcataccggcgactccatcactgtcgcgccggcgcagaccctgaccgacaaggaa
taccagatcatgcgcaacgcctcgctggcggtgctgcgtgagatcggcgtggaaaccggc
ggctccaacgtgcagttcggcatctgtccgaacaccgggcgcatggtggtgatcgagatg
aacccgcgcgtgtcgcgctcctcggcactggcctccaaggccaccggtttccccatcgcc
aagatcgccgccaagctggcagtcggttacaccctcgacgagctgtccaacgacatcacc
ggcggccgcaccccggcctcgttcgaaccggccatcgactacgtggtgaccaaggttccg
cgcttcgccttcgagaaattccccaaggccgacgctcgcctgaccacccagatgaagtcc
gtgggtgaagtcatggccatcggccgtaccttccaggagtcggtgcagaaagccctgcgc
ggtctggaagtcggcgttgccggctttgatccgaagctcgacctgaacgatccggaagcc
gaaagcaccctgcgccgcgagctgaccgtgcccagtgccgaccgcatctggtacgtggcc
gatgccttccgtgccggcaagaccgtcgccgaagtgttcgagctgacccgcatcgacgag
tggttcctggtgcagatcgaggatctggtcaaggacgaggagaaggtcaagaccctcggc
ctgtccgccatcgattacgacctgatgttcaagctcaagcgcaagggcttctccgatgcg
cgtctggccaagctgctgggcgtttccgagaagagcctgcgcgcgcaccgccacaagctg
aaagtgctgccggtgtacaagcgcgtggacacctgcgccgccgagttcgccaccgacacc
gcctacatgtactcgacctacgaggaagagtgcgaggccaacccgtcgagccgcgacaag
atcatgatcctcggcggcggccccaaccgtatcggccagggtatcgagttcgactactgc
tgcgtacacgccgcgctggccatgcgtgaagacggttacgagaccatcatggtcaactgc
aacccggaaaccgtctccaccgactacgacacctccgaccgcctgtacttcgagccggtg
accctggaagacgtgctggaaatcgtccgcgtcgagcagcccaagggcgtgatcgtgcag
tatggcggccagactccgctgaagatctgccgtgcgctggaagaagctggcgtgccgatc
atcggcaccagccccgaggccatcgaccgtgccgaagaccgcgagcgcttccagcagatg
gtgcagcgcctgaacctgcgtcagccggccaacgccactgcacgcagcgaggacgaagcc
ctggccctgtccaagggcatcggctacccgatggtggtgcgtccgtcctatgtgctgggc
ggccgggcgatggaaatcgtctaccaggaagaagagctcaagcgctacatgcgcgaagcg
gtgaaggtgtccaacgacagcccggtgctgctggatcgcttcctcaactgcgccatcgag
gtggacgtggacgcggtcagcgacggcgagaccgtggtgatcggtgcgatcatgcagcat
atcgaacaggccggcgtgcactccggtgactccgcctgctcgctgccgccgtactcgctg
ccggcgcacatccaggacgagattcgcgagcaggtcaagaagatggctctggagctcggc
gtggtcggcctgatgaacgtgcagatggccgtgcagggtgaggacatctacgtcatcgaa
gtgaacccgcgcgcctcgcgtaccgtgccgttcgtctccaagtgcgtcggcgagtcgctg
gccaaggtggcggcgcgcgtcatggccggcaagaccctggccgaagtcggctacaccaag
gaaatcatcccgccgttcttcagcgtcaaggaagcggtgttcccgttcgccaagttcccg
ggcgtcgacccgatcctcggcccggagatgaagtccaccggtgaagtcatgggcgtcggc
gacagcttcggcgaggccttcgccaaggcccagctgggtgccagcgagatcctgccgaat
tccggttgcgccttcatcagcgtgcgtgaggacgacaaggccgaggccgttcaggtcgcg
cgcgatctggtcagcctgggcttcgaggtcgtcgccactgccggtaccgccaaggtgatc
gaggctgccggtctgccggtacgccgcgtgaacaaggtgaccgaaggtcgtccgcacgtg
gtcgacatgatcaagaacgacgaagtcaccctgatcatcaataccaccgaggggcgtcaa
tccatcgctgactcctactcgatccgtcgtaacgctctgcagcacaagatctactgcacc
accaccatcgcggcgggtcaggcggtctgtgaggcgctcaagttcggtcccgagaagacc
gtgcgccggctgcaggatctgcatgcaggaatcaaggcatga
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