Ectopseudomonas hydrolytica: NLY38_20915
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Entry
NLY38_20915 CDS
T08519
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLY38_20915 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phf03019
]
NLY38_20915 (groL)
03110 Chaperones and folding catalysts [BR:
phf03110
]
NLY38_20915 (groL)
03029 Mitochondrial biogenesis [BR:
phf03029
]
NLY38_20915 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phf04147
]
NLY38_20915 (groL)
Enzymes [BR:
phf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NLY38_20915 (groL)
Messenger RNA biogenesis [BR:
phf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NLY38_20915 (groL)
Chaperones and folding catalysts [BR:
phf03110
]
Heat shock proteins
HSP60 / Chaperonin
NLY38_20915 (groL)
Mitochondrial biogenesis [BR:
phf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NLY38_20915 (groL)
Exosome [BR:
phf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NLY38_20915 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NLY38_20915 (groL)
Exosomal proteins of breast cancer cells
NLY38_20915 (groL)
Exosomal proteins of colorectal cancer cells
NLY38_20915 (groL)
Exosomal proteins of bladder cancer cells
NLY38_20915 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UTH30878
LinkDB
All DBs
Position
4455075..4456721
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLAKSFGAPTITKDGVSVAKEI
ELKDAFENMGAQLVKDVASKANDAAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGI
DKATSAIVAQLKDLAKPCADSKAIAQVGTISANSDNSIGDIIAEAMDKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLSLESATLEHLGNAKRVVLNKDNTTIIDGAGAQADIEARVAQIRKQVEETSSDY
DKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAIEGLKGDNEDQNVGIALLRRAVEAPLRQIVANAGGEPSVVVDKVKQGSGNFGFNA
ATDTYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAEAADDKAPAMPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagtcaagtttggcgattccgcccgcaagaaaatgctcgtaggcgtc
aacgtactggccgacgccgtcaaagccaccctcggcccgaaaggccgtaacgtggttctg
gccaaatccttcggcgccccgaccatcaccaaagacggtgtgtcggttgccaaggaaatc
gaactgaaagacgccttcgaaaacatgggcgcccagctggtcaaggacgttgcttccaag
gccaacgacgctgccggtgacggcaccaccaccgctaccgttctggctcaagccatcgtc
aacgaaggcctgaagtccgttgcggccggcatgaacccgatggatctgaagcgcggcatc
gacaaggccaccagcgccatcgttgctcagctgaaagacctggccaagccgtgcgccgac
tccaaggccatcgctcaggtcggcaccatctccgccaactccgacaactccatcggtgac
atcatcgccgaagccatggacaaggtcggcaaggaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtccgtcgtagaaggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaagccggacaccatggttgccgagctggaaggcccgctgctg
ctgctggtcgacaagaagatcagcaacatccgcgaactgctgccggttctggaagccgtt
gccaaggctggccgtccgctgctgatcgtggctgaagacgtcgaaggcgaagccctggct
accctggtcgtcaacaacatgcgcggcatcgtcaaggtcgctgccgtcaaggcgccgggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgccatcctgaccggcggtaccgtg
atctccgaagaagttggcctgtccctggaaagcgccactctggagcacctgggtaacgcc
aagcgcgtcgtgctgaacaaggacaacaccaccatcatcgatggtgctggtgcccaggcc
gacatcgaagcccgcgttgcgcagatccgcaagcaggtcgaagaaacctcttccgactac
gacaaagagaagctgcaagagcgtctggccaagctggccggcggtgttgccgtgatcaag
gttggcgctgccaccgaagtcgagatgaaagagaagaaggcccgcgttgaagacgccctg
cacgctacccgcgctgcagtggaagaaggcgtggtacctggcggtggcgtggctctggtg
cgtgctctgcaggccatcgaaggcctgaagggcgacaacgaagaccagaacgtcggtatc
gctctgctgcgtcgcgctgtcgaagcgccgctgcgtcagatcgttgccaacgccggcggc
gagccgagcgtagtggtcgacaaggtcaagcagggttcgggcaacttcggcttcaacgcc
gcgaccgacacctacggcgacatgatcgagatgggtattctcgacccggccaaggtcacc
cgttccgcgctgcaggcggctgcctccatcggcggcctgatgatcaccaccgaggccatg
gttgccgaagcggctgacgacaaggctccggccatgcctgacatgggcggcatgggcggt
atgggtggcatgggcggcatgatgtaa
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