Pseudomonas hydrolytica: NLY38_21415
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Entry
NLY38_21415 CDS
T08519
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
phf
Pseudomonas hydrolytica
Pathway
phf00550
Peptidoglycan biosynthesis
phf01100
Metabolic pathways
phf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NLY38_21415 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLY38_21415 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phf01011
]
NLY38_21415 (mrdA)
Enzymes [BR:
phf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NLY38_21415 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
phf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NLY38_21415 (mrdA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Glyco_hydro_3_C
Motif
Other DBs
NCBI-ProteinID:
UTH30973
LinkDB
All DBs
Position
complement(4558182..4560074)
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AA seq
630 aa
AA seq
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MPQPIRLKDHEKDARLVKRRVVFCAVAIIVLTCLLIMRMYYLQVVQYEYHSTLAENNRIH
VQPIPPTRGLIFDRNGVIIADNRPSFSLTVTRERAGDWLSVLDTVVEVLELSADERALFE
RRVRQGRRPFEPVPILFELSEEQIARIAVNQFRLPGVEVAAQLVRHYPQQEHFAHSVGYV
GRINEQELKRLDPTDYAGTHHIGKTGIERFYEDELHGEVGYEEVETNARGRVLRVLNRID
PKPGKDIVLSLDVHLQEAAENALGGRRGAVVAIDPNNGEVLAMVSQPSFDPNPFVTGISF
KAYGELRDSIDQPLYNRVLRGLYPPGSTIKPMVAVAGLDAGVVTPTSRVFDPGFYQLPNH
SHKYRNWNRTGDGWVDLNLAIARSNDTYFYDLAHKMGVDRMHDYMSRFGLGQRVALDMFE
ETAGLMPSRDWKRARYRQPWYPGETLILGIGQGYMQTTPLQLAQATALMATRGKWIRPHL
AKSVDGRLPVDPNPMPDIVLRDPKFWEYGIRGMEDVLHGARGTARKVGESSVYRIAGKSG
TAQVVAIKQGEKYDRNKVQERHRDHALFVAFAPVENPQIAVAVMVENGESGSGVAAPVVK
QVMDAWLLDQQTGQLKAEFAQPKNAEVSQR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagccgattcgtctcaaggatcatgaaaaggacgcccgcctggtcaagcgccgg
gtggtgttctgtgctgtggcaatcatcgtgctcacctgcctgctgatcatgcgcatgtac
tacctgcaggtggtgcagtacgagtatcactccacgctggccgagaacaaccgcatccac
gtgcagccgattccgccgacgcgcgggctgatcttcgaccgcaacggggtgatcatcgcc
gacaaccgaccgagcttcagcctgaccgttacccgcgagcgtgccggcgactggctgagc
gtgctcgataccgtggtcgaggtactggagctttccgcggacgagcgcgcgctgttcgag
cgccgcgtgcgccaggggcggcggcccttcgagccggtgccgatcctgttcgagctgtcc
gaggagcagatcgcccgcatcgcggtcaaccagttccgcctgcccggcgtcgaggtggcg
gcgcagctggtgcggcattatccgcagcaggagcacttcgctcattcggtcggctatgtc
ggtcgcatcaacgagcaggaactcaagcgtctcgatccgaccgactacgccggcacccac
catatcggcaagaccggcatcgagcgcttctacgaagacgagctgcacggcgaagtgggt
tacgaagaagtcgagaccaacgcccgtggccgcgtactgcgggtgctcaatcgcatcgac
ccgaagccgggcaaggacatcgtcctgagcctcgacgtgcacctgcaggaggccgccgag
aacgccctgggcggccgccgcggtgcggtggtggcgatcgacccgaacaacggcgaggtg
ctggcgatggtcagtcagcccagcttcgatcccaaccccttcgtcaccggcatcagcttc
aaggcctatggcgagctgcgcgactcaatcgaccagccgctgtacaaccgcgtgctgcgc
ggcctctatccgccgggctcgaccatcaagccgatggtggccgtggccggcctcgatgcc
ggcgtggtcacgcccacctcgcgggtgttcgacccaggcttctatcagttgcccaatcac
agccacaagtaccgtaactggaaccgtaccggtgacggctgggtcgatctcaacctggcc
atcgcccgttccaatgacacctacttctacgatctggcgcacaagatgggcgtcgatcgc
atgcacgactacatgagccgcttcggcctcgggcagcgcgtggcgctggacatgttcgag
gaaaccgcgggcctgatgccctcgcgcgactggaagcgggcgcgctatcgccagccctgg
taccccggcgaaaccctgattctcggcattggccagggctacatgcagaccacgccgctg
cagctggcgcaggctaccgcgctgatggccacccgcggcaagtggatacgtccgcacctg
gccaagagtgtcgatggccgcctgcccgtggacccgaatcctatgccggatatcgtgctg
cgcgatccgaagttctgggaatacggcatccggggcatggaggatgtgctgcacggtgcc
cgcggcaccgcgcgcaaggtcggcgagagttcggtctatcgcatcgccggcaagagcggt
accgcgcaggtggtggcgatcaagcagggtgagaagtacgaccgcaacaaggtccaggag
cgccaccgcgaccacgcgctgttcgtcgccttcgccccggtggagaacccgcagatcgcc
gtggcggtgatggtggagaacggtgagtccggctctggcgtcgccgcgccggtggtcaag
caggtgatggacgcctggttgctggatcagcagacgggccagctcaaggccgagttcgcg
cagccgaagaacgccgaggttagtcagcgatga
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