Ectopseudomonas hydrolytica: NLY38_22180
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Entry
NLY38_22180 CDS
T08519
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf02020
Two-component system
phf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NLY38_22180 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NLY38_22180 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phf03000
]
NLY38_22180 (crp)
Transcription factors [BR:
phf03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
NLY38_22180 (crp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
TrmB
MarR
HTH_28
MarR_2
HTH_11
MltA
GntR
RPA_C
HTH_24
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
UTH31110
LinkDB
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Position
4700558..4701202
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AA seq
214 aa
AA seq
DB search
MVAITLTPKIKNLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIVKGSVTILIEDDDGRE
MIIAYLNSGDFFGEMGLFEKDGAEKERSAWVRAKTECEVAEISYAKFRELTQQDPDILFA
LGSQMAERLRNTTRKVGDLAFLDVTGRVARTLLDLCKQPDAMTHPDGMQIKITRQEIGRI
VGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggttgctattaccctcacacctaaaatcaagaacctcgacaagcttctcgcacactgt
catcgccgtcgctacaccgccaaaagcaccatcatctacgcaggtgatcgctgcgaaacg
ctgttcttcatcgtcaagggctcggtcaccatcctgatcgaggatgacgatggccgcgag
atgatcatcgcctacctcaactctggcgacttcttcggtgagatgggcctgttcgagaag
gatggcgcggagaaggagcgcagcgcctgggtacgcgccaagaccgaatgcgaagtggcg
gaaatcagctacgccaaattccgcgaactgacccagcaggaccccgacatcctcttcgcc
ctcggcagccagatggcagagcgcctgcgcaacaccacgcgcaaggtcggcgatctggcc
ttcctcgatgtcaccggccgcgtcgcccgcaccctgctcgatctgtgcaagcagccggac
gccatgacccacccggacggcatgcagatcaagatcacccgccaggaaatcggccgcatc
gtcggctgctcgcgggagatggtcggtcgcgtactcaagtccttggaagaacagggcctg
gtgcacgtgaaaggcaagaccatggtggtcttcggcacgcgctga
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