Ectopseudomonas hydrolytica: NLY38_23300
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Entry
NLY38_23300 CDS
T08519
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLY38_23300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phf03019
]
NLY38_23300
Messenger RNA biogenesis [BR:
phf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NLY38_23300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
UTH31324
LinkDB
All DBs
Position
complement(4949178..4949657)
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AA seq
159 aa
AA seq
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MIDSDGFRPNVGIILTNDVGQVLWARRINQDAWQFPQGGINDRESPEEALYRELNEEVGL
EEQDVKILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLTGAEDRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLIVRD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgattctgatggtttccgcccgaatgtcggcatcatcctgaccaatgatgtcggg
caggtgctctgggcccggcgcatcaaccaggatgcctggcagtttccccagggcggcatc
aacgatcgtgagtcgccggaagaggcgctgtaccgcgaactgaacgaagaagtggggctg
gaagagcaggatgtgaagatcctcgcctgcacccgtggctggttgcgttatcgtctgccg
cagcgcctggtgcgcacccacagccagccgctgtgcatcgggcagaagcagaagtggttt
ctgctgcgcctgaccggtgccgaggaccgggtgcgcatggacctgaccggcaagcccgag
ttcgatggctggcgctgggtcagctactggtacccgctgggccaggtggtcacattcaag
cgcgaggtgtaccgccgcgcactcaaggaactcgccccgcgcctgatagtgcgcgactga
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