Ectopseudomonas hydrolytica: NLY38_25010
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Entry
NLY38_25010 CDS
T08519
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf03030
DNA replication
phf03430
Mismatch repair
phf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLY38_25010
03430 Mismatch repair
NLY38_25010
03440 Homologous recombination
NLY38_25010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phf03032
]
NLY38_25010
03400 DNA repair and recombination proteins [BR:
phf03400
]
NLY38_25010
Enzymes [BR:
phf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NLY38_25010
DNA replication proteins [BR:
phf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NLY38_25010
DNA repair and recombination proteins [BR:
phf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NLY38_25010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DUF5998
Motif
Other DBs
NCBI-ProteinID:
UTH31645
LinkDB
All DBs
Position
5314019..5314726
Genome browser
AA seq
235 aa
AA seq
DB search
MSEHAARDWPQLFAGLAESSRDPRLRAYYGAGCVAADTPLTEVPLVALDVETTGLDPREH
AIVSLGLVPLSLQRIRCSEARYWVVKPAGELSAESVTFHHITHSDIRHAPRLASVLDELL
EALAGKVVVAHYRHIERSFLDQALRRHLGEGLIFPIIDTMELEARLHPKRRVSWWDRLRG
RRPLSIRLADSRLRYGLPLYSAHHALTDALACGELLQAQVAKHYPPHTPVGALWS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcacgcggcccgggactggccgcaactcttcgccggccttgccgaaagcagc
cgcgacccacgcctgcgcgcctactacggcgccggctgcgtcgccgccgatacgcccctg
accgaggtgccgctggtggcgctggacgtggaaaccaccgggctcgacccgcgtgagcac
gccatcgtcagcctcggcctggtgccgctcagcctgcagcgcatccgctgcagcgaggcg
cgctactgggtggtcaagcccgctggcgaactgagcgccgaatcggtgaccttccaccac
atcacccacagcgatatccgccacgccccgcgcctggccagcgtactggacgaactgctc
gaagcactggccggcaaggtggtggtggcgcactaccgccacatcgagcgcagcttcctc
gaccaggccctgcgccggcacctgggcgaagggctgatcttccccatcatcgacaccatg
gagctggaagcccgcctgcatcccaaacgcagggtcagctggtgggatcgtctgcgcggc
cgccgcccgctctccatccgcctggccgacagccgcctgcgctacggcctgccgctatac
tcggcgcaccatgcgctgaccgatgccctggcctgtggcgagctgctgcaggcgcaagtg
gcgaagcactatccgccgcatacgccggtcggggcgctctggagctga
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