Polaribacter huanghezhanensis: KCTC32516_00319
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Entry
KCTC32516_00319 CDS
T09192
Symbol
mrdA
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
phg
Polaribacter huanghezhanensis
Pathway
phg00550
Peptidoglycan biosynthesis
phg01100
Metabolic pathways
phg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
phg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KCTC32516_00319 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KCTC32516_00319 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phg01011
]
KCTC32516_00319 (mrdA)
Enzymes [BR:
phg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KCTC32516_00319 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
phg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KCTC32516_00319 (mrdA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WKD84982
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Position
complement(327709..329595)
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AA seq
628 aa
AA seq
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MKRSFLLYFFITLAGLILIARLFQLQVINGADLDPNHNATVKVIYDYPERGYIFDRNEKL
LVANQLSYDVMVVPSEVEPLDTIEFCNLLKIDIDYFKRKYKTAKNYSPWLPSVFLKQLAK
EDFAFLQEKLHKFKGFYIQKRSIRNYPINSAANVLGYISEVNELEAKNNPNFQQGELIGS
SGVEKSYDSILRGIKGKKFLRRNRLNKIIGKYKNGEFDTLAVNGQDITLTIDSELQQYGE
LLMSGKRGAIVAIEPKTGEILALVSAPTYNPNMMVGRKRSKNSVILMDPENPDKPTFDRA
LLATYAPGSPFKLINALIGLQEGVIDENSYVYCYGGYQYGNKKSDFQKCHCNIFGGPIKL
HRAIAKSCNSYFSTAYRKIIDNAESASIGMDTWSNHVKSFGLGNYLGYDLPIGNRGLIPD
GKYYDSRYKYSWGPTTNISNAIGQGEILTTPIQLANVTAAIANKGYFFTPHVLKKTVGEN
VKDPKFTVEKRTTIDSKYFDPIIEGMHEVFKTGTGRLSKVNGIDIVGKTGTSENFAIING
VRKQLKDHSILIAFAPKDDPKIAIAIFVENGGYGSTIAAPITSLMIEKYLHKKITGKNRK
WIEKSMIHLSLKDVYHQKDLITETEFKD
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtagctttttactttacttttttattactctagcaggattgatattaatagca
agattgtttcaattacaagtgatcaatggagcggatttagatccaaatcataatgctact
gtaaaagtaatttatgattatcctgaacgcggttatatttttgatagaaacgaaaaactt
ttagtagccaatcaactttcttatgatgtaatggtcgttcctagtgaagttgaaccgtta
gacaccatagagttttgtaatcttttaaagattgatattgactattttaaacgaaaatac
aagactgctaaaaattactcaccttggcttccatcggtatttttaaaacaattggcaaaa
gaagattttgcttttttacaagaaaaacttcataaatttaaagggttttatattcaaaaa
agaagcattagaaattatccaattaactcagcggcaaatgtgctgggttatataagtgag
gtaaatgagctagaagcaaaaaacaatccaaattttcagcaaggagaattaattggaagt
agcggagtagaaaaatcgtacgattccattttacgtggaattaaggggaaaaaatttctc
cgccgaaatagattaaacaaaattataggaaaatataaaaatggagaatttgatacattg
gccgtaaacggacaagatatcactttaactattgatagtgaattgcaacaatatggagaa
ttgttaatgtctggaaagcgtggagcaattgttgcaattgaaccaaaaactggagagatt
ttagctttagtctctgctccaacgtacaatcctaacatgatggttggaagaaaaagatct
aaaaattcagttattttaatggaccctgaaaatccagataaacctacttttgacagagct
ttgctagcaacgtatgctccaggatcaccttttaaactaatcaatgctttaattggttta
caagaaggcgttatagatgaaaactcctatgtttattgctatggcggctatcagtacgga
aataaaaaaagtgattttcaaaaatgtcattgtaatatttttggaggaccaatcaaattg
catagagcaattgcaaaatcttgtaacagttatttttctacagcctacagaaaaataata
gacaatgcagaatctgcaagtatcggaatggatacttggagcaatcatgtaaaaagtttt
ggattaggaaattatttaggatatgatttaccgattggtaatcgaggtttgatcccagac
ggaaaatattatgattctcgatataaatattcttggggaccaacaacaaatatctctaac
gctattggtcaaggagaaattttaacgactcctattcaattagcaaatgttactgctgca
attgccaataaaggctatttttttacaccacatgtattaaagaaaacagttggtgaaaac
gtcaaagaccccaaatttacagtcgagaaaagaacaacgattgattctaaatattttgac
ccaatcatagaaggaatgcacgaagtttttaaaacaggaacaggaagattaagtaaagta
aacggaatagatattgtaggaaaaactgggacttctgaaaattttgcaattataaacgga
gtaagaaaacaattaaaagaccattctattctaattgcttttgcgccaaaagatgatcct
aaaattgcaattgcaatttttgtagaaaatggaggctacggatctacaattgccgcgcca
attacaagtttaatgatagaaaaatacttgcataaaaaaataaccggaaagaatagaaag
tggatagaaaaaagcatgattcaccttagtttaaaagatgtttatcatcaaaaagattta
ataactgaaacagaatttaaagattga
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