Polaribacter huanghezhanensis: KCTC32516_00606
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Entry
KCTC32516_00606 CDS
T09192
Symbol
ribD_2
Name
(GenBank) Riboflavin biosynthesis protein RibD
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
phg
Polaribacter huanghezhanensis
Pathway
phg00240
Pyrimidine metabolism
phg01100
Metabolic pathways
phg01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
phg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
KCTC32516_00606 (ribD_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phg02044
]
KCTC32516_00606 (ribD_2)
Enzymes [BR:
phg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
KCTC32516_00606 (ribD_2)
Secretion system [BR:
phg02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
KCTC32516_00606 (ribD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC_N
APOBEC4_like
APOBEC3
NAD1
APOBEC2
APOBEC1
APOBEC4
NAD2
AID
Motif
Other DBs
NCBI-ProteinID:
WKD85266
LinkDB
All DBs
Position
617780..618205
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AA seq
141 aa
AA seq
DB search
MNKKQHKYDTAYLKMAQEWAKLSHCERKQVGALIVKDRMIISDGFNGTPTGFENFCEDEE
NYTKWYVLHAEANAILKVASSTQSCKDATLYITMSPCKECSKLIHQAGIKRVVYANAYKD
DTGLQFLKKAGVELMHLTHEE
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaagcaacacaaatacgatactgcttatctgaaaatggctcaagaatgggca
aaattatcgcactgcgaacgcaaacaagtgggcgctttgattgtaaaagacagaatgatt
atttctgacggatttaacggaactccaactggttttgaaaacttttgcgaagacgaagaa
aattacacaaaatggtatgtgttgcatgcagaagcaaatgccatcttaaaagttgcttct
tctacacaatcttgtaaagatgcaacgttatacatcacgatgtcgccttgtaaagaatgt
agtaaattaattcatcaagcaggaataaaaagagtggtatatgcaaatgcttataaagat
gatactggtttgcaattcttaaaaaaagcaggtgtagaactaatgcatttaacacatgaa
gaataa
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