Polaribacter huanghezhanensis: KCTC32516_00665
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Entry
KCTC32516_00665 CDS
T09192
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
phg
Polaribacter huanghezhanensis
Pathway
phg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KCTC32516_00665 (rhlE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phg03019
]
KCTC32516_00665 (rhlE_2)
Enzymes [BR:
phg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KCTC32516_00665 (rhlE_2)
Messenger RNA biogenesis [BR:
phg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KCTC32516_00665 (rhlE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
NAD_binding_3
AAA_22
Shikimate_DH
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
WKD85325
LinkDB
All DBs
Position
complement(677531..678808)
Genome browser
AA seq
425 aa
AA seq
DB search
MSFQSLGLNSALLKAVEKQGYKTPSPIQKKAIPLILEGKDVLASAQTGTGKTAGFTLPML
QILDATRSDKFRPIRALILTPTRELAAQVYDNVRDYGAYLNMKSTVVFGGVKAKAQIATI
RQGVDVLVATPGRLLDLENQNALSLKRVEILVLDEADRMLDMGFLRDIKKIMSLMPAKRQ
NLLFSATFSREIKDLAAKILHNPVLVEATPQNSTAEKVDQKVYRVDKGQKTTLITKLITD
GNWKQVLVFTRTKHGANKLTKKLIESKISAAAIHGNKSQGARTKALAQFKTNDIRVLVAT
DIAARGLDIPLLPHVINFELPNIPEDYVHRIGRTGRAGAKGEALSLVCIEEMEYVRQIEK
LLGQKLESEVVEGFEPNNTTEPGKPNSNKPKKKNHAPRNSSKKPTNNNRKRNDNRSSRRD
SSKRR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcaatcattaggattaaacagcgctttgttaaaagctgttgaaaaacaaggg
tataaaactccgtctccaattcaaaaaaaagcaattcctttaattttagaaggaaaagat
gtcttagcatctgcccaaacgggaacagggaaaacagctggatttacgttgccaatgtta
cagattttagacgctacaagaagtgataaatttagaccgattagagcgttaatattaaca
ccaacaagagaattggctgctcaggtttatgacaatgttagagattacggcgcttattta
aatatgaaatctactgtggtttttggaggtgtaaaagcaaaagcccaaatagcaaccatt
agacaaggagttgatgttttggtggcaactccgggaagattgttggatttggaaaatcaa
aatgccttgtctttaaaaagagtggagattttagtgttggatgaagccgacagaatgttg
gacatgggttttttaagagatatcaaaaagattatgagcttgatgcctgcaaagcgtcaa
aacttattattttctgcaactttttctagagagataaaagacttggctgcaaaaattctt
cacaatcctgttttagtagaagctacaccgcaaaattctacggcagaaaaagtagatcaa
aaagtatatcgcgtagataaaggacaaaaaacaacattaattacaaagttaattactgat
gggaattggaaacaagtattggtttttacaagaaccaaacacggcgcaaacaagcttaca
aaaaaattaattgaaagtaaaatttctgcagctgctattcatggaaataaaagtcaagga
gctagaacaaaagcgttggcgcaatttaaaaccaacgacattcgtgttttagtagcaacc
gatatcgcagcacgtggtttagacattccgttattgccacatgtaatcaattttgaattg
ccaaatattcctgaagattatgtgcacagaattggtagaacaggtagagctggtgcaaaa
ggagaagccttgtctttggtttgtattgaagaaatggagtatgttagacaaatagaaaaa
ttattagggcaaaaattagagtcagaagttgttgagggttttgagccaaataacacaaca
gaacctggtaaaccaaattctaataaaccaaagaagaaaaatcacgcacctagaaattct
tcaaaaaagcctacaaataataatagaaaacgaaatgacaatcgttcttctagaagagat
agtagtaaaagaagataa
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