Polaribacter huanghezhanensis: KCTC32516_01058
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Entry
KCTC32516_01058 CDS
T09192
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
phg
Polaribacter huanghezhanensis
Pathway
phg02020
Two-component system
phg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KCTC32516_01058 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KCTC32516_01058 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phg03021
]
KCTC32516_01058 (rpoN)
Transcription machinery [BR:
phg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KCTC32516_01058 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
WH_PARP12
T3SSipB
Motif
Other DBs
NCBI-ProteinID:
WKD85713
LinkDB
All DBs
Position
complement(1099066..1100523)
Genome browser
AA seq
485 aa
AA seq
DB search
MLKQSLNFKLLQKLSPQQIQLMKLIQLPTQAFEERLKQEIEENPALDTGKEEPEDFEDSL
ENEYEDDGNEKIDTEDINIDEYLSDDEIPNYKTQANNYAADDEDREMPYASGTSFHQSLQ
NQLNTFRLNDEERSIAEFLVGSIDDSGYIRRDLLDLVDDLAFTQNVFTTEEKVLELLVNV
VQKLDPIGVGARDLKECLIIQLKTKSAQKVRTLAIAILETSFDHFVKKHYNKLMEKFTIS
EEELKEVIQEISRLNPKPGSSYAGNNKFAEQIIPDFSIKIIDGELDLTLNSRNAPELHVS
KEYNNMLKGYQESKEKSKSQKDAVQFIKQKLDAAKWFIDAIRQRQQTLLVTMNSIMHYQY
DYFLTGDERKLKPMILKDIADQIKMDISTVSRVANSKYVSTPYGTKLIKEFFSESMKNDQ
GEDVSTREIKKILQNVIGDEDKRKPLTDDKLSLVLKEKGYPIARRTIAKYREQLDIPVAR
LRKEI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaacaaagtttaaattttaagctactacaaaaattatctccacagcaaatacag
ctgatgaagttaattcagttgcctacacaagcctttgaagagcgtttaaaacaagaaata
gaagaaaatccggcattagatacaggcaaagaagaacccgaagattttgaagattcttta
gaaaacgaatacgaagatgatgggaacgaaaaaattgacaccgaagacatcaatattgat
gaatatttgagtgatgatgaaattcctaattataaaacacaagcaaataattatgctgca
gatgatgaagatagagaaatgccgtatgcatctggcacctcttttcatcaatcattgcaa
aaccaactaaacacgtttcgtcttaatgatgaagaaagaagtattgcagaatttttagtc
ggtagtattgatgacagcgggtatatcagaagagatctcttggatttagtagatgattta
gcttttactcaaaatgtatttacaaccgaagaaaaagtacttgaattattagtaaatgtt
gttcagaaattagatccaattggtgttggtgcaagagatttaaaagaatgtttaatcatt
caactaaaaactaaatcagcacaaaaagtaagaaccttggcgattgctattttagaaact
tcttttgatcattttgtaaagaaacattacaataaattaatggaaaagtttaccatttct
gaggaagaacttaaagaagttattcaagaaattagcaggttaaatccgaaacctggcagt
tcttatgcaggtaataataaatttgcagaacaaattattccagatttctctatcaaaatt
atagatggtgaattagatttgacgctaaattctagaaatgccccagaattgcatgtatcg
aaagagtataataatatgcttaaaggatatcaagagtctaaggagaaatcaaaatctcag
aaagatgctgtgcaatttatcaaacaaaaattagatgctgcaaaatggtttattgatgcc
attagacaacgacaacaaaccttgttggttaccatgaacagcattatgcattatcaatat
gattattttttaacgggtgatgagcgaaagctaaaaccgatgattttaaaagatattgcc
gatcaaattaaaatggatatttctactgtttctagagttgcaaatagcaaatatgtttct
acaccttacggaacaaaattgattaaggaattcttctcagaatcgatgaaaaacgatcaa
ggagaagatgtatcgacgagagaaattaaaaaaatattacaaaatgttattggagatgag
gacaaaagaaaacctttaacagatgacaaattatctttggttttaaaagaaaaaggatac
ccaattgccagaagaaccattgccaaatatagagagcaattagatattcctgttgctaga
ttacgaaaagaaatttag
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