Polaribacter huanghezhanensis: KCTC32516_01207
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Entry
KCTC32516_01207 CDS
T09192
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
phg
Polaribacter huanghezhanensis
Pathway
phg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KCTC32516_01207 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phg03021
]
KCTC32516_01207 (sigA)
Transcription machinery [BR:
phg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KCTC32516_01207 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
T3SS_ATPase_C
Motif
Other DBs
NCBI-ProteinID:
WKD85860
LinkDB
All DBs
Position
complement(1266158..1267021)
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AA seq
287 aa
AA seq
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MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQIALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYAFLEQENERPPSAEEIAKKLDMTVNDVKESMKNSGRHV
SMDAPLIEGEDSNLYDVLNSGESPNPDRALLHESLRVEISRALETLTPREADVVKLYFGL
GEHQPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILMTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattaccaagcaggttactaatagagaaactgcatcattagataaa
tatttacaagaaatagggaaggttgatttgattactgccgatgaagaagtagaattagca
caacgtataaaagccggagatcaaatcgctttagaaaagttaacaaaagctaatttacgt
tttgttgtttcggtagcaaaacaatatcaaaatcaaggattaactttaccagatttaata
aatgaaggtaatttaggattgattaaagcggcaaaacgttttgatgaaactcgtggattt
aaatttatctcgtatgccgtttggtggattcgtcaatctattttacaagcattggcagaa
caatctagaattgtccgtttgccgttaaacaaaattggctctatcaacaagatcaataaa
atgtacgctttcttagaacaagaaaacgaacgtccaccaagtgcagaagaaattgctaag
aaattagacatgactgtaaatgacgtaaaagaatcaatgaaaaattctggtcgccacgtc
tcaatggatgcaccattaattgaaggagaagactctaacttatacgatgtattaaattca
ggtgaatctccaaatccagacagagcgttattgcacgaatctttacgagtagaaatttct
agagctttagaaacactaactccaagagaagcagatgtagtaaaattatactttggttta
ggggaacaccaaccaatgactttagaagaaattggtgaaacgttcgatttaactcgtgag
cgtgttcgtcaaattaaagaaaaagcaattcgcagattaaaacatacatcaagaagtaaa
attttaatgacgtaccttggttag
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