Polaribacter huanghezhanensis: KCTC32516_01861
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Entry
KCTC32516_01861 CDS
T09192
Symbol
uvrA_2
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
phg
Polaribacter huanghezhanensis
Pathway
phg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KCTC32516_01861 (uvrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phg03400
]
KCTC32516_01861 (uvrA_2)
DNA repair and recombination proteins [BR:
phg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KCTC32516_01861 (uvrA_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KCTC32516_01861 (uvrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
AAA_21
UvrA_DNA-bind
AAA_29
AAA_16
nSTAND3
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_22
AAA_18
AAA_14
AAA_33
ATPase
AAA_25
NACHT
ATPase_2
AAA_23
cobW
Viral_helicase1
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WKD86485
LinkDB
All DBs
Position
complement(1951982..1954774)
Genome browser
AA seq
930 aa
AA seq
DB search
MKLDLNSVNPKENIIIKGASLHNLKNIDVVIPRNKLVVITGLSGSGKSSLAFDTLYAEGQ
RRYVESLSSYARQFLGKLHKPKVDYIKGIAPAIAIEQKVNSTNPRSTVGTSTEIYDYMKL
LFARIGNTYSPISNKQVKKDTVADVIKHVKTYEIGSKLLLLAPVFLDKTRDLKTLLNIFS
QQGYARIKMGDAILRIEDFPFDAYKEETLQLVVDRIILKDDEDFYNRLADAIQTAFFEGK
GTCFLENLSTNKTVEFSNKFELDGITFLEPNTHLFSFNNPYGACPTCEGYGNVIGIDEEL
VIQNTGLSIYEDAIVPFKSESFRKYKDDLVHNAIDFDIPIHKPWFELTEKQKELVWTGNK
KFDGINHFFQKLEEKSYKIQNRVMLSRYRGKTTCTDCHGKRLRKETNYVKIDHKTISDLV
TLPIDELAGFFKNINLNNQELKIGKRLLTEINNRLQFLLNVGLSYLTLNRTSNTLSGGES
QRINLATSLGSSLVGSMYILDEPSIGLHPKDTERLIGVLQDLRDLGNTVIVVEHDEDIMK
IADYIIDIGPEAGTFGGHVVAEGNFKDILKSDSLTAKYLNEKLKIEVPKTRRKSTNFIEV
VGAREHNLKNIDVTFPLNNLTVITGVSGSGKSTLVKNILYPAMQKKLFGYGDKLGQFTEI
KGSFSNLKHIEFIDQNPIGRSSRSNPVTYIKAYDDIRNLFSNQKLAKIRNYKPKHFSFNV
EGGRCEVCKGDGEVTIEMQFMADVHLECDACNGKRFKKEVLEITFDGKSIDDILTSTIDD
AVAFFAENEQTKIVQKLKPLQDVGLGYVQLGQSSSTLSGGEAQRIKLASFLVKGNTKDKA
LFIFDEPTTGLHFHDIKKLLASFNALIEKGHSIIVIEHNIELIKCADYIIDLGLEGGKNG
GNLIFQGTPEELILNKKSYTSKYLKEKLVF
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagatttaaacagcgtaaatccgaaagaaaatatcattattaaaggtgcaagt
ttgcacaatttaaaaaatatagatgttgttattcctcgtaataaattagttgtaattaca
ggtttgtctggctcaggaaaatcctctttggcttttgatacgttgtatgcagaaggacag
cgacgttatgtagagagtttgtcttcgtatgcgcgtcagtttttaggaaaattacacaaa
ccaaaagtagattatatcaaaggaattgcgcctgcaatcgccattgaacaaaaagtaaat
tctacaaacccgagatctaccgttggcacatcaacagagatttacgattatatgaaattg
ttgtttgccagaattggcaacacctactcgcctatttctaacaaacaagtaaaaaaagat
acagttgcagatgtaatcaaacatgtaaaaacctatgaaattggctctaaactattattg
ttagcacccgtttttttagataagactagagatttaaaaacattgttgaatattttttct
caacaaggatatgcaagaattaaaatgggcgatgctattttaagaattgaagattttccg
tttgatgcttataaagaagaaacgttacaattggtggtagatcgaattattttaaaagat
gatgaagatttttacaacagattggcagacgccattcagactgctttttttgaaggaaaa
ggaacctgttttttagaaaatttaagcaccaacaaaacagtcgagtttagcaataaattt
gagttagacggaattacgtttttagagccaaacacacacttgttcagttttaacaatccg
tacggcgcttgtccaacttgcgaaggctacggaaatgtcatcgggattgatgaagaatta
gtcattcaaaatacaggtttgtctatttatgaagacgccatcgttccttttaaatctgaa
tcctttagaaaatacaaagatgatttagtacataacgccatcgattttgacattccgatt
cacaaaccttggtttgagttgacagaaaaacaaaaagaattggtttggactggaaataaa
aagtttgacggaatcaatcatttctttcaaaaattagaagaaaaaagttataaaattcag
aatagagtgatgctttctcgatatagaggaaaaacaacatgtacagattgtcacggaaaa
cgcttgcgaaaagaaaccaattatgtaaaaattgatcacaaaacaatttctgatttggtt
acgttacctattgatgaattggcaggtttttttaagaacatcaacctaaataatcaagaa
ttaaaaattggaaaacgtttgttgacagaaatcaataacagattacaatttttattgaac
gtcggattgagttatttaacgttgaatagaacttcaaatacactttctggcggagaaagt
cagcgcattaatttagcaacttcattgggaagctctttagtgggatcgatgtatatttta
gatgaaccaagtattggtttgcatccaaaagatacagaacgtttgattggcgttttacaa
gatttacgtgacttaggaaatacggttattgtagttgaacatgatgaagacatcatgaag
attgcagattatattattgatattggtccagaagcaggaacttttggtggacatgttgtt
gcggaaggtaattttaaagacattttaaaatccgattctttaacagcaaagtatttgaat
gaaaaattaaaaattgaagttccaaaaacccgaagaaaatcaaccaactttattgaagtt
gttggcgcaagagaacacaatttaaagaatattgatgttacttttccgttgaacaatcta
acggtaattacgggagtttctggtagcggaaaaagcaccttagttaaaaatattttgtat
ccagcgatgcaaaaaaaactgtttggttacggcgataaattagggcaatttacagaaatt
aaaggttcgtttagcaacttaaaacacatcgaatttatcgaccaaaatcctattggacgc
tcgtctcgttcaaatcctgtaacatatataaaagcctacgatgatatcagaaatttattt
tcaaaccagaagttagcgaaaatcagaaattacaagccaaaacatttttcttttaatgtt
gaaggcggacgctgtgaggtttgtaaaggcgatggagaagttaccattgaaatgcaattt
atggcagatgtgcatttagaatgtgatgcctgtaacggaaaacgcttcaaaaaagaagtg
ttagaaattacttttgatggaaaatcgattgatgatattttaacgtcaacaattgatgat
gctgttgcattttttgcagaaaatgagcaaacaaaaattgttcagaaattaaaacctttg
caagatgttggtttgggttatgtgcaattaggacagtcttcttctaccctttctggtgga
gaagcgcagcgaattaaattggcgtcgtttttagtaaaaggaaacaccaaagacaaagcc
ttatttatttttgatgaaccaactacaggtttgcattttcatgatatcaaaaaattattg
gcgtcgtttaatgcactgatagaaaaaggacattctattattgtaattgaacacaatatc
gaattgataaaatgtgccgattacattattgatttaggtttagaaggcgggaaaaatggc
ggaaatctaatttttcaaggaacgccagaagaattaattttgaataaaaaatcgtacacc
tctaaatacttaaaagagaaattagtgttttag
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