Polaribacter huanghezhanensis: KCTC32516_01924
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Entry
KCTC32516_01924 CDS
T09192
Name
(GenBank) Putative bifunctional exonuclease/endonuclease protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
phg
Polaribacter huanghezhanensis
Pathway
phg03030
DNA replication
phg03430
Mismatch repair
phg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KCTC32516_01924
03430 Mismatch repair
KCTC32516_01924
03440 Homologous recombination
KCTC32516_01924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phg03032
]
KCTC32516_01924
03400 DNA repair and recombination proteins [BR:
phg03400
]
KCTC32516_01924
Enzymes [BR:
phg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KCTC32516_01924
DNA replication proteins [BR:
phg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KCTC32516_01924
DNA repair and recombination proteins [BR:
phg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KCTC32516_01924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
DUF7508
C2_SHIP1-2_first
HEAT_EF3_GNC1
Motif
Other DBs
NCBI-ProteinID:
WKD86548
LinkDB
All DBs
Position
complement(2024719..2025798)
Genome browser
AA seq
359 aa
AA seq
DB search
MYAILDIETTGGKFNEEGITEIAIYKFDGHAVVDQLITLVNPEKDIQPFVVQLTGINNKM
LKNAPKFHEVAKRILEITEDCIIVAHNSSFDYRILKTEYKRLGYQFKRDTLCTVELSRKL
IPDKPSYSLGKLCKSLGIPMNDRHRASGDALATIQLFKLLLNKDVDKTILKSTIKHFDSK
KVAEKLTGLMEAIPTIMGVYYLHKDDGEIIFMGKGSNIKSDLTNQFVKTTKRALKVQEKI
ASISYESTGNMLLTSLKYFLELDVNKPKYNLKSKKRMLSKSFNSDNMLLIDKGRTIDERS
IIVIENNEVLGYCFTNLAFQENQMSILKEMLTPILNKELAKTIIKNYLKNKSVLKIIRF
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaattttagatattgaaactaccggaggaaaatttaacgaagaaggaattact
gaaattgcaatctacaagtttgacggacatgctgttgtcgatcaacttattacattggta
aatccagaaaaagacattcagccttttgtggtacaacttaccggaatcaacaataaaatg
ctaaaaaatgctccaaaatttcacgaagtagcaaaacgaatcttagaaattacagaagat
tgtattattgttgctcacaactcgagttttgattatcgtattttaaaaacagaatacaaa
cggttaggatatcaatttaaaagagacacgttgtgtacggttgaattaagtagaaaattg
attccagacaaaccttcatacagtttaggtaaattatgtaaatctctcggaataccaatg
aatgatagacatagagcttctggtgatgcactcgcgactattcaactttttaaactattg
ttaaataaggatgttgacaaaacaatactaaaaagcaccattaaacattttgattctaag
aaggttgcagaaaaactaactggtttaatggaagcaattcccacaattatgggcgtttat
tatttgcataaagatgacggagaaattattttcatgggcaaaggaagcaacataaaaagt
gatcttacaaatcagtttgtgaaaacgacaaaacgagcacttaaagttcaagaaaaaata
gcttcaataagttacgaatctactggaaatatgttacttaccagcttaaaatatttttta
gaactggatgtaaacaaaccaaaatacaatttaaaaagtaaaaaaagaatgctgtcaaaa
agctttaatagcgacaatatgttgttgattgacaaaggaagaactattgatgagcgttcg
ataattgtaatagaaaataacgaggttttaggatattgttttaccaacttggcttttcaa
gaaaatcaaatgagcattttaaaagaaatgcttactcctattttaaataaagagttggct
aaaaccatcataaaaaattatttaaaaaataaatcagttttaaaaattataagattctag
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