Polaribacter huanghezhanensis: KCTC32516_02199
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Entry
KCTC32516_02199 CDS
T09192
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
phg
Polaribacter huanghezhanensis
Brite
KEGG Orthology (KO) [BR:
phg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phg03400
]
KCTC32516_02199 (phrA)
Enzymes [BR:
phg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KCTC32516_02199 (phrA)
DNA repair and recombination proteins [BR:
phg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KCTC32516_02199 (phrA)
Prokaryotic type
KCTC32516_02199 (phrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
GBD_ELAPOR1
Motif
Other DBs
NCBI-ProteinID:
WKD86819
LinkDB
All DBs
Position
complement(2334844..2336115)
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AA seq
423 aa
AA seq
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MNVFWFRRDLRLEDNVALYKATLEKEPVIPLFIFDIDIIDSLPKDDARITFIFNTLKKID
TELKKVNSSVLIKIGKPIEIWKELISEYKIDKVFYNKDYEPYAISRDLEVAQFLNSKNIG
VFSYKDQVVFEESEVVKADGLPYTVFTPYKNKWLSKFNDISLSENNPKSNFYNFKTVFPS
LESIGFVESKIKVKRYNLAHLDQYDAIRDFPFVDKTSYVSPYLRFGLVSARKLIKIALKS
NATYLSELIWREFFMQILFHFPKVVTQNFKSKYNQIEWRNNEQEFEAWCKGETGYPMVDA
GMRQLNQTGYMHNRVRMVTAGFLCKHLLIDWRLGEAYFAEKLVDYDLSANNGNWQWAAGT
GCDSAPYFRIFNPTEQLKKFDKNLEYTNTWVKDLNEFTYPQPIVEHKFARERALFTYKKG
LNL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtattttggtttcgtagagatttacgtttagaagataatgttgctttatacaag
gcaactttagaaaaagaacccgtaattcctctttttatttttgatatagatattatagat
tctttgccaaaagatgatgcaagaattacgtttatttttaatactttaaaaaagattgat
actgaattaaaaaaagtcaattcatcagtattaattaagataggaaaaccaattgaaatt
tggaaagagttaatttctgaatataaaatcgataaagttttttacaacaaagattacgaa
ccctatgcaatttctagagatttagaagttgctcagtttttaaattcaaaaaacattgga
gttttttcgtataaagatcaggttgtttttgaagaatcagaagttgtaaaagctgacgga
ttgccgtatactgtttttacaccttataaaaacaaatggttgtcaaaatttaatgatatt
tcattatctgaaaataatcctaaatctaatttttacaatttcaaaacggtttttccttct
ttagaatccattggttttgtggaaagtaaaatcaaagtaaaacggtataatttagctcat
ttagatcagtacgatgctattagagattttccgtttgtcgataaaacatcttatgtttct
ccgtatttgcgtttcggtttagtaagtgctagaaaattgattaaaattgcacttaaaagt
aatgcaacctatttaagtgaattaatttggagagaattttttatgcagattttatttcac
tttccgaaagttgttactcagaattttaaaagtaaatacaatcagattgagtggagaaac
aacgagcaagaatttgaagcttggtgcaaaggagaaacgggttatccgatggttgatgca
ggaatgcggcagttaaaccaaacaggatatatgcacaacagagtccgtatggtaacagca
gggtttttgtgtaaacacttattaattgattggcgtctaggagaggcttattttgctgaa
aaattagtagattatgatttgtcagctaacaatgggaattggcaatgggcggcaggaaca
ggatgcgattctgctccatattttagaatttttaatccaacagagcaactgaaaaagttt
gacaaaaatttagaatacaccaatacttgggtaaaagatttgaacgaatttacgtatcca
caaccaattgtggaacataaatttgctagagaaagagcattatttacctataaaaaaggg
ttgaatttataa
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