KEGG   Pseudonocardia sp. HH130630-07: AFB00_05535
Entry
AFB00_05535       CDS       T04486                                 
Name
(GenBank) hypothetical protein
  KO
K19124  CRISPR system Cascade subunit CasC
Organism
phh  Pseudonocardia sp. HH130630-07
Brite
KEGG Orthology (KO) [BR:phh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:phh02048]
    AFB00_05535
Prokaryotic defense system [BR:phh02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    AFB00_05535
SSDB
Motif
Pfam: Cas_CT1975
Other DBs
NCBI-ProteinID: ANY05852
LinkDB
Position
complement(1166141..1166821)
AA seq 226 aa
MRKDEAKRRAKTDSSIDVALFGRMIADDADLNVDAAAQVAHAISVHAVTNEYDYFTAVDD
HKNADAEEDAGAGMIGTVEFNSATLYRYAAVDVDRLYDTLGDPAATRRAVEAFVRAFVTS
MPTGKQNTFANRTLPDAVLVVARETQPINLVGAFEEAITDERRIPAALDRLATHATELHD
AYGETPLAAWTFGPGDRLAPLGRIADRSDLDSTVTAIGDTVSARLS
NT seq 681 nt   +upstreamnt  +downstreamnt
gtgcgcaaggacgaggccaagcgccgggcgaagaccgacagctcgatcgacgtcgccctg
ttcggacggatgatcgccgacgacgccgacctcaacgtcgatgccgcagctcaggtcgcg
cacgcgatctcggtgcacgccgtaaccaacgagtacgactacttcaccgccgtcgacgac
cacaagaacgccgacgccgaggaggacgccggggcggggatgatcggcaccgtcgagttc
aactccgccacgctgtaccgctacgccgccgtcgacgtcgaccggctgtacgacaccctc
ggtgacccggccgcgacgcgacgggcggtggaggcgttcgtccgtgcgttcgtcaccagc
atgccgaccggcaagcagaacaccttcgccaaccggacgctgcccgacgccgtcctcgtc
gtcgcccgcgagacccagccgatcaacctcgtcggggcgttcgaggaggccatcaccgac
gagcggcggatcccggccgcactggaccgcctggccacccacgccaccgagctgcacgac
gcctacggcgagactccgctcgcggcgtggacgttcggtcccggtgatcgcctggctccc
ctcggacgtatcgcggatcgcagtgacctcgacagcaccgtgaccgcgatcggtgacacc
gtgtcggcgcggctgtcgtga

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