Pseudonocardia sp. HH130630-07: AFB00_05585
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Entry
AFB00_05585 CDS
T04486
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
phh
Pseudonocardia sp. HH130630-07
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phh03400
]
AFB00_05585
Enzymes [BR:
phh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
AFB00_05585
DNA repair and recombination proteins [BR:
phh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
AFB00_05585
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ANY05858
UniProt:
A0A1B1ZJC7
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All DBs
Position
complement(1175341..1176843)
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AA seq
500 aa
AA seq
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MPQDRSAPLWLFADQLGPHVWDTDEFAGREVVLVESERALARKPFHRQKLHLVLSGMRHL
ADELGDRATYLRTGTYREALEKVGHPVVVHQPTSFPASDMVRRFRSDGLVSEIRPTPAFA
LGKDEFDEWAGDRDTFRMEDFYRTQRERFDVLMEGTEPVGGKWNYDHDNRESPPKGAGTL
DVRAPWQPREDEIDDRVRADLDRAAKAGTRPTVGVDGPRRFAVTHGEATTALRHFVRHRL
DTFGPYEDAVLAQDWAMAHSLLSVPLNLGALHPLEAVRAAERAYHDGTARLSSVEGFVRQ
VLGWREFVWQLYWRFGRGYTRRNHLRARTPLPDWWSDLDADAVTARCLSSALADVRDRGW
THHIPRLMILGNHALQRGYTPAEVNAWFATAFVDGFAWVMPPNVIGMSQYADGGAMVTKP
YSSGGAYIDRMTDFCSGCAFDPKVRVGERACPFTAGYWQFVHRHRELHASNHRTARAVAT
MDRLRDLDALLEQESAREEY
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaggaccgcagcgccccgctctggctgttcgccgaccagctgggaccgcacgtc
tgggacaccgacgagttcgccggccgggaggtcgtgctggtcgagtccgagcgtgcgctg
gcccgcaagccgttccaccggcagaagctgcacctggtgctgtcgggcatgcgccacctc
gccgacgagctcggtgaccgggccacctacctgcggaccgggacctaccgggaggcgctg
gagaaggtcgggcacccggtcgtcgtgcaccagccgacgtcgttcccggcctcggacatg
gtgcggcggttccggtccgacgggctggtctccgagatccgcccgacgccggccttcgcg
ctcggcaaggacgagttcgacgagtgggccggggaccgcgacacgttccggatggaggac
ttctaccggacccagcgggagcgcttcgacgtcctgatggagggcaccgagcccgtcggc
gggaagtggaactacgaccacgacaaccgcgagtccccgcccaagggggcaggcaccctc
gacgtgagggccccgtggcagccccgcgaggacgagatcgacgaccgggtccgggccgat
ctcgaccgcgccgcgaaggccggtacccggccgacggtcggcgtcgacggcccgcgccgg
ttcgcggtgacccacggcgaggcgacgacggctctgcggcacttcgtccggcaccgcctg
gacaccttcggcccgtacgaggacgcggtgctggcgcaggactgggcgatggcgcactcg
ctgctgtcggtgccgctgaacctcggcgcgctgcacccgctggaggcggtccgggccgcc
gagcgcgcctaccacgacgggacggcccggctgtccagcgtcgagggcttcgtccggcag
gtgctcggctggcgcgagttcgtgtggcagctgtactggcggttcggccgcggctacacc
cggcgcaaccacctgcgggcccgcaccccgctgccggactggtggtcggacctggacgcc
gacgccgtcaccgcgcggtgcctgtcctcggcgctggccgacgtccgggaccgcggctgg
acccaccacatcccgcggctgatgatcctcggcaaccacgccctgcagcgcggctacacc
ccggccgaggtgaacgcctggttcgcgacggcgttcgtcgacgggttcgcctgggtcatg
ccgccgaacgtgatcgggatgagccagtacgccgacggcggggcgatggtgaccaagccg
tactcctccggcggagcctacatcgaccggatgaccgacttctgctccggctgcgcgttc
gacccgaaggtccgggtgggcgagagggcctgcccgttcaccgcggggtactggcagttc
gtgcaccggcaccgggagctgcacgcgtcgaaccaccggacggcgcgggcggtcgcgacg
atggaccggttgagagatctggacgcgctgctggagcaggagtcggcgcgggaggagtac
tga
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