Pseudonocardia sp. HH130630-07: AFB00_06060
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Entry
AFB00_06060 CDS
T04486
Name
(GenBank) DEAD/DEAH box helicase
Organism
phh
Pseudonocardia sp. HH130630-07
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Methyltransf_17
CMS1
Motif
Other DBs
NCBI-ProteinID:
ANY09834
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Position
1268557..1270119
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AA seq
520 aa
AA seq
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MVSALAENDIVRTFAIQELTLPLALAGEDVIGQARTGTGKTLGFGVPMLQRITPPGEQPA
ATAEGEAADRSKDVPQALVVVPTRELCVQVARDIAAAGKHLGVRVVAIYGGRAYEPQLEA
LRKGVDVIVGTPGRLLDLAEQRHLVLGRVKALVLDEADEMLDLGFLPDVERILRMLPEQR
HTMLFSATMPGPIVQLSRAFLTRPTHIRAEEADQGSIHERTKQLVYRAHAMDKVELVTRV
LQAKDRGLSMIFTRTKRTAQRVADDLAERGFAAAAVHGDLGQGAREQALRAFRAEKVDVL
VATDVAARGIDVTGVTHVVNYQCPEDAKTYVHRIGRTGRAGREGVAVTLVDWDEIPRWKM
ISDDLNLGIPEPVETYSTSDHLFSDLGIAPGASGRLPLSARTRAGLDAEYIDSEGDHQGS
RKQRGGRPGRDGDSGGDGESRRPRRNRSRTRTRGGVAVDASGAEQGASAGGADGSAPAPQ
NGPAGSADGGETKPRRRRRRGGSRNRSGSGGDSSADAAAS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atcgtctccgcgctcgcggagaacgacatcgtccgcaccttcgcgatccaggagctgacc
ctcccgctcgcgctggccggtgaggacgtcatcggccaggcccgcaccggtaccggcaag
accctcggcttcggcgtcccgatgctgcagcggatcaccccgcccggtgagcagccggcc
gccaccgccgagggcgaggccgccgaccgcagcaaggacgtgccgcaggcgctcgtcgtc
gtgcccacccgcgagctgtgcgtgcaggtcgccagggacatcgcggccgcgggcaagcat
ctgggcgtgcgcgtcgtcgccatctacggcggccgcgcctacgagccgcagctggaggcc
ctgcgcaagggcgtcgacgtcatcgtcggcacccccggccggctgctcgacctcgccgag
cagcgccacctcgtgctcggccgggtcaaggcgctggtcctcgacgaggccgacgagatg
ctcgacctgggcttcctgcccgacgtcgagcggatcctgcggatgctgcccgagcagcgc
cacaccatgctgttctcggccacgatgccggggccgatcgtgcagctgtcccgggcgttc
ctcacccggcccacgcacatccgtgcggaggaggccgaccagggctccatccacgagcgc
accaagcagctcgtctatcgcgcgcacgcgatggacaaggtcgagctggtcacccgggtg
ctgcaggccaaggaccgtggcctgtcgatgatcttcacccggaccaagcggaccgcccag
cgggtcgccgacgacctggccgagcgcggcttcgccgccgccgccgtgcacggcgacctc
ggccagggcgcccgcgagcaggcgctgcgcgcgttccgcgcggagaaggtcgacgtgctg
gtcgcgacggacgtcgccgcccgcggtatcgacgtcaccggcgtgacccacgtggtcaac
taccagtgcccggaggacgccaagacctacgtgcaccggatcggccgcaccggccgggcc
gggcgcgagggcgtcgccgtcaccctggtggactgggacgagatcccccgctggaagatg
atctcggacgacctgaacctgggcatccccgagccggtcgagacctactcgacgtccgac
cacctgttcagcgacctgggcatcgcaccgggcgcgagcgggcggctgccgctgtcggcg
cgcacccgggccgggctggacgccgagtacatcgactccgagggcgaccaccagggctcg
cgcaagcagcgcggcggccgccccggtcgcgacggtgactccggcggcgacggcgagagc
cgccggccgcggcgcaaccggtcccgcacccgtacccgcggcggcgtcgccgtcgacgcg
tccggggcggagcagggcgcgtccgcgggcggtgccgacggctcggcccccgcaccgcag
aacggccccgcgggctcggcggacggcggcgagaccaagccgcgccgcaggcgccgccgc
ggcggttcgcggaaccggtccggctccggcggggactcctccgccgacgccgccgcgagc
tga
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