Pseudonocardia sp. HH130630-07: AFB00_07490
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Entry
AFB00_07490 CDS
T04486
Name
(GenBank) sugar ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AFB00_07490
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
AFB00_07490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phh02000
]
AFB00_07490
Transporters [BR:
phh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
AFB00_07490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
ANY06168
LinkDB
All DBs
Position
complement(1560447..1561496)
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AA seq
349 aa
AA seq
DB search
MSLTLGRRGLLLGGALLGGTALAGCTSNTPAAGPESGANVGAGGDNAAPGREVTIGFSAP
AADHGWMAAISRNATAQAEQFPDVTLQATEGTNDVNQQIAQVETLINGRPDVLVVLPFDG
AALTTVGRAAMDAGIPVVNIDRVFDTALAYRTWIGGDNYGMGVSAGTWIADHLTRNQVTD
PVIGEIAGIDSLPLTRQRSQGFADALAARGFSVGPRVSAEFTVESGERQTANLLQSASRL
DAVWNHDDDQGVGVLAAIEAAGRSEFVLVGGAGSTNAMDRIKADDGVLKATVLYSPTMAS
SAIGLARLIGQGRGLGDLVEHEVPTSITAHSATVTRENVDEYLPVGFAS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcaccctcggccgccggggcctgctgctcggcggcgcgctgctcggcgggacg
gccctcgccggctgtacctccaacaccccggccgccggccccgagtccggtgcgaacgtc
ggcgccggcggcgacaacgccgcacccggccgggaggtcaccatcgggttcagcgccccg
gccgccgaccacggctggatggcggcgatcagccgcaacgccaccgcccaggccgagcag
ttcccggacgtgaccctgcaggccaccgaggggaccaacgacgtcaaccagcagatcgcc
caggtcgagacgctgatcaacggccggccggacgtgctcgtggtgctcccgttcgacggg
gcggcgctcaccaccgtcggccgggccgcgatggacgccggcatccccgtcgtcaacatc
gaccgggtcttcgacaccgcgctcgcctaccggacctggatcggcggcgacaactacggc
atgggggtcagcgcgggcacctggatcgccgaccacctcacccgcaaccaggtcaccgac
ccggtgatcggcgagatcgccgggatcgactcgctcccgctgacccgccagcgcagccag
ggcttcgccgacgcgctcgccgcccgcgggttctcggtcggcccgcgggtctcggccgag
ttcaccgtcgagtccggcgagcgccagacggcgaacctgctgcagtccgcgagccggctc
gacgccgtctggaaccacgacgacgaccagggtgtcggggtgctcgccgcgatcgaggcc
gccgggcgcagcgagttcgtcctggtcggcggcgccggctcgacgaacgcgatggaccgg
atcaaggccgacgacggcgtgctcaaggcgaccgtcctctacagcccgaccatggcgtcc
tcggcgatcgggctggcccggctgatcgggcaggggcgcgggctgggcgatctcgtcgag
cacgaggtgccgaccagcatcaccgcgcactcggccaccgtgacccgggagaacgtcgac
gagtacctgccggtggggttcgcctcgtga
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