Pseudonocardia sp. HH130630-07: AFB00_07935
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Entry
AFB00_07935 CDS
T04486
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
phh
Pseudonocardia sp. HH130630-07
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phh03000
]
AFB00_07935
Transcription factors [BR:
phh03000
]
Prokaryotic type
Helix-turn-helix
Other families
AFB00_07935
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_8
GAF
Sigma54_activ_2
HTH_30
HTH_50
AAA_16
HTH_29
Phage_NinH
Sigma54_activat
ABC_tran
nSTAND3
HTH_17
HTH_28
AAA_5
HTH_22
HTH_23
AAA_22
AAA
AAA_30
HTH_7
NACHT
TsaE
Motif
Other DBs
NCBI-ProteinID:
ANY09888
UniProt:
A0A1B1ZW02
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Position
1647615..1649429
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AA seq
604 aa
AA seq
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MPASALSTAAAERIAAARVAFLHRDTVSADAVRPPILASWIRSRDMAVSSEQLDLPETEC
ETDSPLTRAARPIVAELCDQFATEPVSLILCDHDGVVLDRRTGDSALGRHLDRVWLAPGF
SYAERHVGTNGIGTALEGRRPAQVFGHEHFVEHLEDLACAGAPIRHPVTGKILGVVDLTC
WRREANALMVATASTTARRIEEALLAASGRHELTLLHDYLAAVARAGNTAVLAVGDDLVM
MNDRARELIAPADQVPLLAEATDALRSGRSRQLVVDLPSGTTARVQCRPSWVEPGSAGGV
LQVSLAHRETASRSTSTPTITTALPTAVGSGALWTKCAQAVDRHLRTSEWVVLQGEPGSG
RTTLARATHHLHAPAGHVRILDAAEYGPRWLGEVSDELSGGGGGTLVLREIDTLSPAATA
ALADVLEPYRESTCPERPWVAATRGSGTSDTAELSALLRAFPRTIEVPPLRHHVEDVAEL
VPYLLARLTRGSDLTCAPEALRVLMRNRWPGNVEQLYQVLRKVVARRRSGVIRVEDLPPE
TRALTRRVLTPLESIECDAIVDALLDASGNKAEAARRLGMSRATIYRKIRGYGIAVPEST
TMPG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
ctgcccgcctccgccctctcgacggccgcggccgagcgcatcgccgccgcccgggtcgct
ttcctgcaccgcgacaccgtctccgccgacgccgtccggccgccgatcctcgcgtcctgg
atccggtcgagggacatggccgtctcctccgagcagctcgacctccccgagaccgagtgc
gagaccgacagcccgctgaccagggccgcccggccgatcgtcgcggagctgtgcgaccag
ttcgccaccgagccggtcagcctgatcctctgcgaccacgacggcgtcgtgctggaccgg
cggaccggggacagtgcgctgggccggcacctggaccgggtctggctggcacccggcttc
tcctacgccgagcggcacgtcggcacgaacggcatcgggaccgcgctggaggggcgccgg
ccggcgcaggtgttcggccacgagcacttcgtcgagcacctcgaggacctcgcctgcgcc
ggggcaccgatccggcacccggtcaccgggaagatcctcggggtcgtcgacctgacctgc
tggcggcgcgaggcgaacgcgctgatggtggcgacggcgtccaccacggcccggcggatc
gaggaggcgctgctggccgcctccggccggcacgagctgacgctcctgcacgactatctc
gccgccgtcgcacgggccgggaacaccgccgtcctcgcggtgggcgacgacctcgtgatg
atgaacgaccgcgcccgcgagctcatcgcaccggccgaccaggtgccgttgctcgccgag
gcgaccgacgcgctgcgcagcggccggtcccggcagctggtcgtcgacctgcccagcggg
acgacggcccgcgtgcagtgccgcccgagctgggtcgagccgggctcggccggtggggtg
ctgcaggtgtcgctggcccaccgggagacggcgtcgcggtccacctcgaccccgacgatc
accacggcgctgccgacggccgtcgggtccggcgcgctgtggacgaagtgcgcgcaggcc
gtcgaccggcacctgcgcacctcggagtgggtggtgctgcagggcgaacccggctccggc
cggaccaccctggccagggccacccaccacctgcacgccccggccgggcacgtccggatc
ctcgacgccgcggagtacgggccgcgctggctgggcgaggtgtccgacgagctctccggg
ggcggcggcgggacgctggtgctgcgcgagatcgacacgctgtccccggccgcgacggcc
gcgctcgccgacgtgctggagccctaccgcgagtcgacctgtcccgagcgaccgtgggtc
gcggccacccgcggctccggtacgtcggacaccgccgagctctcggcgctgctgcgggcg
ttcccccgcaccatcgaggtcccgccgctgcgccaccacgtcgaggacgtcgccgagctg
gtcccctacctgctcgcccgcctcacccggggcagcgacctgacctgcgcaccggaggcg
ctgcgggtcctgatgcgcaaccggtggccgggcaacgtcgagcagctctaccaggtgctg
cgcaaggtcgtggcccggcggcgcagcggcgtgatccgggtcgaggacctgccgccggag
acccgggcgctgacccgccgggtgctcacgccgctggagtcgatcgagtgcgacgcgatc
gtcgacgccctgctggacgcgtccggcaacaaggccgaggccgcccggcggctggggatg
agccgggcgacgatctaccgcaagatccgcgggtacggcatcgccgtgcccgagagcacc
accatgcccgggtag
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