Pseudonocardia sp. HH130630-07: AFB00_07970
Help
Entry
AFB00_07970 CDS
T04486
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
phh
Pseudonocardia sp. HH130630-07
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phh03400
]
AFB00_07970
Enzymes [BR:
phh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AFB00_07970
DNA repair and recombination proteins [BR:
phh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AFB00_07970
Prokaryotic type
AFB00_07970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ANY06247
UniProt:
A0A1B1ZKG9
LinkDB
All DBs
Position
complement(1654785..1656173)
Genome browser
AA seq
462 aa
AA seq
DB search
MSSSTAVVWFRRDLRVADQPIFLAAADAADRALALFVLDPTLLGPAGAARTNFLYGCLRE
LDSALGGRLLVVKGDPADVVPRVAAAVGAGTVHIAADFGPYGSERDGRVEQALAEGDVEL
VRTGSPYAVAPGRVTKGDGDPFKVFTPFSRAWTDHGWRSPAETSASTCTWMDPSGKDGGP
RAVQVPHDESCESDLPEPGEQAGLDRWDDFLDEGVMDYDSDRDLPAKRGTSGMSPYLKYG
CVHPRTMLADLAKHRGDSVKAYRTEIAWREFYADVLHRRPDSARGNYDRSFDHLPLRTDE
SARADFERWQKGRTGFPIVDAGMRQLRAQAWMHNRVRMVVASFLVKDLHLPWWWGARHFM
QLLVDGDLASNQHGWQWTAGSGTDASPYFRVFNPITQGERFDPDGDYVRRWVPELAEVSG
KAVHQPWKLADGIPEGYPEPMVEHKAERQEALARYDAVKAAR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccagtaccgccgtcgtctggttccggcgtgacctccgggtcgccgaccaaccg
atcttcctcgccgccgccgatgccgcggaccgagcgctcgcgctgttcgtgctggacccg
acgctgctcgggccggccggggcggcgcgcacgaacttcctctacggctgcctgcgggaa
ctggactccgcgctcggcgggagactgctcgtggtgaagggcgacccggccgacgtcgtc
ccgcgggtggcggcggccgtcggggccgggacggtgcacatcgccgcggacttcggtccc
tacgggagcgaacgcgacggcagggtcgagcaggcgctcgccgagggcgacgtcgagctc
gtccgcaccgggtccccgtacgccgtcgcacccggccgggtcaccaagggcgacggtgac
cccttcaaggtgttcaccccgttcagccgggcctggaccgaccacggctggcggtccccg
gccgagacctcggcgtcgacctgtacctggatggatccgtccggcaaggacggcgggccg
cgcgcggtccaggtgccgcacgacgagtcctgcgagtccgacctgcccgaacccggcgag
caggccggtctggaccgctgggacgacttcctcgacgagggcgtcatggactacgactcc
gaccgcgacctgccggcgaagcgcgggacgtccgggatgtcgccctacctcaagtacggc
tgcgtgcacccgcgcacgatgctcgccgacctcgcgaagcaccgcggcgactcggtcaag
gcgtaccgcaccgagatcgcctggcgggagttctacgccgacgtgctgcaccgccgcccg
gactcggcgcggggcaactacgaccggtccttcgaccacctgccgctgcgcaccgacgag
agcgcccgggccgacttcgagcgctggcagaagggccggaccgggttcccgatcgtcgac
gccgggatgcgccagctccgggcccaggcgtggatgcacaaccgggtgcggatggtcgtc
gcgtcgttcctggtgaaggacctgcacctgccgtggtggtggggcgcccggcacttcatg
cagctgctggtcgacggcgatctcgcctcgaaccagcacggctggcagtggaccgccggg
tccgggaccgacgcgtcgccgtacttccgggtcttcaacccgatcacccagggggagcgg
ttcgaccccgacggggactacgtgcgccggtgggtcccggagctggccgaggtgtccggg
aaggccgtgcaccagccctggaagctcgccgacggcatcccggagggctacccggagccg
atggtcgagcacaaggccgagcggcaggaggcgctggcccgctacgacgccgtcaaggcc
gcccggtag
DBGET
integrated database retrieval system
