Pseudonocardia sp. HH130630-07: AFB00_09485
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Entry
AFB00_09485 CDS
T04486
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFB00_09485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phh02000
]
AFB00_09485
Transporters [BR:
phh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AFB00_09485
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF5045
Motif
Other DBs
NCBI-ProteinID:
ANY06487
UniProt:
A0A1B1ZL60
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All DBs
Position
complement(1966036..1967697)
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AA seq
553 aa
AA seq
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MQAKRWATAITAGLLALTMTACAASDRGSGGEDGATGGTFVFGAAGAPKNFDPTFNDDGE
SFRPARQMFDTLITYKQGTTELEPGLATAWESSPDGKTWTFTLRDGVKFHDGTALDAAAV
CANFDRWFQMKGAAAQSQMIYYGDVFEGFAQNEGDASGDPVYKSCTAQDPTTAVLNLNKF
KGAFPAAFGLTSFSISSPAALEQYDADAVTQSGDSFTYPAYATEHPTGTGPFRFESFDKA
NGTITLARNDDYWGEKAKVDKLIFKIIPDENARKQELAAGTIDGYDYPSPADYGTLKEQG
NQVLIRDPFSILYVGFNTKNNPALRDLKVRQAIAHAIDRESLVRTKMPEGSAVAQEFVPP
TVAGYAQQVTQYPYDPAKAKQLLAEAGQPNLTLNFYYPTEVTRPYMPNPSDLFSAMAANL
EAVGITVNPVARPWNGGYKDDVQKAGKHDLHMLGWTGDYNDAGNFVGTFFGREKAEFGPQ
NPAMFDELAKADAIPDPAGHAAAYEKANADIMSTYLPAVPILTTGPAIVVKDNVQGVIPS
PLTDERFYTVSKN
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgaaacggtgggccacggcgatcaccgctggactgctggcgctgaccatgacg
gcgtgtgcggcctccgatcggggctccggcggcgaggacggcgcgaccggcgggacgttc
gtcttcggagcggccggtgcgccgaagaacttcgacccgacgttcaacgacgacggcgag
agcttccggccggcgcgccagatgttcgacacgctgatcacctacaagcagggcaccacc
gagctggagcccggtctcgccaccgcctgggagtcctcgccggacggcaagacctggacg
ttcaccctgcgcgacggcgtgaagttccacgacggcacggcgctcgacgcggccgccgtc
tgcgcgaacttcgaccggtggttccagatgaagggcgccgccgcccagagccagatgatc
tactacggcgacgtcttcgagggcttcgcgcagaacgagggcgacgcctccggcgacccg
gtctacaagtcctgcaccgcgcaggacccgaccaccgccgtgctgaacctgaacaagttc
aagggcgccttcccggccgcgttcggcctgacctcgttctcgatctccagcccggccgcg
ctcgagcagtacgacgccgacgccgtgacccagagcggggactccttcacctaccccgcc
tacgccaccgagcaccccaccggcaccgggccgttccgcttcgagagcttcgacaaggcg
aacggcaccatcaccctcgcccgcaacgacgactactggggcgagaaggccaaggtcgac
aagctgatcttcaagatcatcccggacgagaacgcccgcaagcaggagctggccgccggc
accatcgacggctacgactacccgagcccggcggactacgggacgttgaaggagcagggc
aaccaggtcctgatccgggacccgttctcgatcctctacgtcggcttcaacaccaagaac
aacccggccctgcgcgacctcaaggtccgccaggcgatcgcgcacgcgatcgaccgggag
tcgctggtgcgcaccaagatgccggagggctcggccgtcgcgcaggagttcgtgccgccg
accgtcgcgggctacgcccagcaggtcacccagtacccgtacgacccggcgaaggccaag
cagctgctcgccgaggccggtcagccgaacctgacgctgaacttctactacccgaccgag
gtcacccggccctacatgccgaacccgtccgacctgttctccgcgatggcggcgaacctg
gaggccgtcggcatcacggtcaacccggtcgcgcggccgtggaacggcggctacaaggac
gacgtccagaaggcaggcaagcacgacctgcacatgctgggctggaccggcgactacaac
gacgccggcaacttcgtcggcacgttcttcggccgggagaaggccgagttcggcccgcag
aacccggcgatgttcgacgagctggccaaggccgacgcgatcccggacccggccgggcac
gccgcggcgtacgagaaggccaacgccgacatcatgtcgacgtacctgccggcggtgccg
atcctcaccaccggtccggcgatcgtcgtcaaggacaacgtccagggcgtcatcccgagc
ccgctcaccgacgagcggttctacaccgtcagcaagaactga
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