Pseudonocardia sp. HH130630-07: AFB00_09515
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Entry
AFB00_09515 CDS
T04486
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh03030
DNA replication
phh03430
Mismatch repair
phh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFB00_09515
03430 Mismatch repair
AFB00_09515
03440 Homologous recombination
AFB00_09515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phh03032
]
AFB00_09515
03400 DNA repair and recombination proteins [BR:
phh03400
]
AFB00_09515
Enzymes [BR:
phh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFB00_09515
DNA replication proteins [BR:
phh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AFB00_09515
DNA repair and recombination proteins [BR:
phh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AFB00_09515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DnaX_C
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANY06493
UniProt:
A0A1B1ZL53
LinkDB
All DBs
Position
complement(1971326..1973893)
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AA seq
855 aa
AA seq
DB search
MALAPEGPGNIDVVELDAASHGGVEDARELRDRAFYAPAESRYRVFVVDEAHMVTNQGFN
ALLKIVEEPPEHLVFIFATTEPEKVLPTIRSRTHHYPFRLIPPGTMRSLLERICGDEEVT
VAPPVFPLVIRAGGGSARDTLSVLDQLIAGAGPEGVTYERAVALLGVTDSGLIDDAVDAL
AAADGAAVYGAVDRLVEAGHDPRRFASDLLQRFRDLMLLQVVPDAAEQGLVDGAADELTR
MADQAALLGPAALTRYGEILHQGLVEMRGATAPRLLLELLCARMLLPAATMSDGGLLERL
ERIERRNAIAPEPAGGEGAPAKRFVRASERGGEAPEPPSRPDAGAADPGARSGGQGAPAR
RGGASPVAAVAAVAPTVVDGNGGPAQEPGDGSAAGPEPAGTGAAARVDGPTGNGPAAPGT
PPARPADGDPATGPEGTASGSGPATTEDGSSAAADTGPKDTGPEDTAASPAPSGPGETAG
SSGSGTATPAPGADATGATDQGSGDPTPVGTGPGTPGTGSGAAAPSGSDGSGSEAAGSTS
AGPGETGSGEAGSGTAGSGTAGSGTAGSGTARPDTAEPDRAGTGSGTPRTGARTADAERT
GSGTAAEGAAPAVTDHPEPPRDGAPADAVPPTSAQPAPAVSSLDATAVRRVWPEVLAAVR
QRSRSTEALLVNATVRAIDGDTLVLAIGAPPLARRLSEQRNTDVISDALRAVLGVQWQVR
CDQGEAGGAARRAAPERQPRPVPQRPSQQRGASPERGSGGGAQGRGSGRAPGPDGDIPLP
PEPPPDDAPPDPAESGGARGGRSAPVQRVSQADAEEAMLAEAAAEAAKPGTRRDPEAAAL
GILEEHLGARTVEPK
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
gtggccctcgcgccggaggggccgggcaacatcgatgtcgtcgagctcgacgccgcgtcc
cacggtggtgtggaggatgcccgcgagctgcgcgaccgcgcgttctacgccccggcggag
tcgcgctaccgcgtgttcgtcgtcgacgaggcgcacatggtcaccaaccaggggttcaac
gcgctgctcaagatcgtcgaggagccaccggagcacctggtcttcatcttcgcgaccacg
gagccggagaaggtcctccccacgatccggtcgcggacccaccactacccgttccggctg
atcccgccgggcaccatgcggtcgctgctggagcggatctgcggcgacgaggaggtcacc
gtcgcgccgccggtgttcccgctggtcatccgggccggtggcgggtcggcgcgggacacg
ctctcggtgctggaccagctgatcgccggggcgggcccggagggggtgacctacgagcgg
gccgtggcgctgctcggcgtcaccgactccggcctgatcgacgacgcggtggacgcactg
gccgcggccgacggggccgcggtctacggcgcggtggaccggctggtcgaggccggtcac
gatccgcgccgcttcgcctccgacctgctgcagcggttccgggacctgatgttgctgcag
gtcgtgccggatgccgccgaacagggcctggtcgacggcgcggcggacgagctgacccgg
atggccgaccaggcggcgctgctcggcccggccgcgctcacccggtacggcgagatcctg
caccagggcctggtcgagatgcgtggggcgaccgcgccgcggctgctgctggagctgctg
tgcgcccggatgctcctgcccgcggcgacgatgtcggacggcggcctgctcgagcgtctc
gaacggatcgagcggcggaacgcgatcgccccggagcccgcgggcggtgagggtgccccc
gccaagcggttcgtccgcgccagcgagcgcggcggcgaggcgccggagcccccgtcccgt
ccggatgccggagcggcggatcccggtgcgcggtccggtgggcagggcgcgccggcgcgg
cgcggtggcgcgtccccggtggcagctgtggcagctgtggcgccgacggtcgtcgatggg
aacggtggaccggcgcaggaacccggggacgggagcgcggcgggcccggaaccggccggt
accggtgcggcagcccgggtcgacggccccaccggtaacggcccggcggcccccggcacg
ccgcccgcccgcccggccgacggcgatccggcgaccggcccggaggggacggcatccggc
agtggtccggccacgacggaggacgggtcctcggccgccgcggacacgggcccgaaggac
acgggcccggaggacacggcggcctccccggcgccgagcgggccgggcgagaccgccggg
tcgagcggatccggtacggcgacccctgcacccggtgccgacgccaccggagcgacggac
cagggctccggtgaccccactccggtcggtaccgggcccggtacgcccggaaccggatcc
ggcgccgcagcgccgtccgggtccgacggatccgggtccgaggcagccgggtccacgtcg
gctgggcccggggagaccgggtcaggggaggccggatccgggacagccgggtccgggacg
gcggggtccgggacagccgggtccgggacggcccggccggacacagccgagccggacagg
gccggaaccgggtccggcacgccgaggaccggggcccgcaccgccgatgcggagcggacc
ggttccggcacggccgcggagggcgcagccccggcggtgacggaccatcccgagcccccg
cgcgacggcgcccccgccgacgcggtcccgcccacctccgcccagcccgcgcccgcggtc
tcctcgctggacgcgaccgccgtgcgccgggtctggcccgaggtgctcgcggccgtccgg
cagcgcagccggagcaccgaggcactgctggtcaacgccacggtccgggcgatcgacggg
gacaccctggtcctcgcgatcggtgccccgccgctggcccggcggctgtccgaacagcgc
aacaccgacgtgatcagcgatgcgctgcgggcggtgctcggcgtgcagtggcaggtgcgc
tgcgaccagggggaggccgggggcgcggcgcgccgggccgccccggagcggcagccgcgg
ccggtgccgcagcggccgtcccagcagcgcggggcgtctcccgagcgtggctcgggcggc
ggggcgcagggccgtgggtccggccgggcccccgggccggacggcgacatcccgctgccc
cccgagccgccgccggacgacgccccgccggacccggccgagtccggcggggcccgtggt
ggccgcagcgcacccgtgcagcgggtcagccaggccgacgccgaggaggccatgctcgcc
gaggccgccgccgaggcggcgaagccggggacccggcgcgacccggaggcggcggcactc
gggatcctggaggagcacctcggcgcccgcacggtcgagcccaagtga
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