Pseudonocardia sp. HH130630-07: AFB00_15545
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Entry
AFB00_15545 CDS
T04486
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh03420
Nucleotide excision repair
phh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AFB00_15545
03430 Mismatch repair
AFB00_15545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phh03400
]
AFB00_15545
Enzymes [BR:
phh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AFB00_15545
DNA repair and recombination proteins [BR:
phh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFB00_15545
MMR (mismatch excision repair)
Other MMR factors
AFB00_15545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ANY07472
UniProt:
A0A1B1ZNY3
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All DBs
Position
3184188..3186641
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AA seq
817 aa
AA seq
DB search
MSALFELPGTSSTTEPKTSRGRQLLEGLNDRQREAVTHAGSPLLIVAGAGSGKTRVLTHR
IGWLLAERGVHPGEIMSITFTNKAAAEMKERVDGLVGRRSGPMWVSTFHSMCVRILRREA
KHLGVRSAFSVYDADDSRRLVGIVGRDLELDPKKFAPRALAAQISNLKNELLSPDDAAER
AGTDHERRIAEVYGIYQSRLRQANAFDFDDLIMETVSLLDRMPAVAEYYRRRFRHVLVDE
YQDTNHAQYELVRQLVLPATEKARPAELCVVGDSDQSIYAFRGANIRNIIEFEQDFPDAR
TILLEQNYRSSQTILSAANAVIARNPERRDKRLWSDAGDGERVVGYVADNEHDEASFVAR
EIDRLVDTGEYRNSDIAVFYRTNNQSRVFEDVFLRVGMPYKVVGGVRFYERREIRDALAY
LRVLSNPEDTVSLRRILNVPKRGIGDRAESVVAEYAERERTSFARALRTAAEEPARLPAL
ATRSQKNIAGFVRMLDELGELVERGDDTAEILEAVYGRTGYVEELQASEDPQDGTRMDNL
AELVTVAREFAGDAAVADLAVGGDPDAGGAIGSGPGPDAAGPDATDGPGNDDDTDAGAPE
PGSLAAFLERVALVADADSIPDDESGVVTLMTLHTAKGLEFPVVFLTGWEDGVFPHLRTL
GDPKELAEERRLAYVGITRAEQRLYLSRAIVRSAFGQPSTNPASRFLDEVPPELTDWRRT
EEQLVAERPSAPVGRFGFGRSGGRGSGDRGDWKVPERSLNNTSLQLDVGDRVNHDKYGLG
TVVASDGVGPRATVTIDFGSGGTVRLMLIGGVPMQKL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgctgttcgaacttccaggtacgagctcgacgaccgagccgaagacgtcgcgc
gggcgtcagctgctggaggggctcaacgaccggcaacgcgaggccgtgacccacgccggc
tccccgctgctcatcgtcgcgggtgccggctcgggcaagaccagggtgctcacccaccgc
atcggctggctgctcgccgagcgcggcgtgcaccccggcgagatcatgtcgatcaccttc
acgaacaaggccgcggccgagatgaaggagcgggtggacgggctggtcgggcgccgctcc
ggcccgatgtgggtctccacgttccactccatgtgcgtgcggatcctgcgccgcgaggcc
aagcacctgggcgtgcgcagcgccttctcggtgtacgacgcggacgactcgcgccggctg
gtcggcatcgtcgggcgggacctggagctcgaccccaagaagttcgccccgcgggcactc
gcggcgcagatctcgaacctgaagaacgagctgctctcgccggacgacgcggccgagcgg
gccggcaccgaccacgagcggcgcatcgccgaggtctacgggatctaccagtcccggctg
cgccaggcgaacgcgttcgacttcgacgacctgatcatggagacggtctcgctgctggac
cggatgcccgcggtggccgagtactatcggcgacggttccggcacgtgctggtcgacgag
taccaggacaccaaccacgcccagtacgaactggtccgccagctggtgctgccggcgacc
gagaaggcccgcccggccgagctgtgcgtggtcggcgactccgaccagtcgatctacgcg
ttccgcggcgcgaacatccgcaacatcatcgagttcgagcaggacttcccggacgcacgg
accatcctgctggagcagaactaccgctccagccagacgatcctgtccgcggcgaacgcg
gtgatcgcccggaacccggagcgccgggacaagcgcctgtggtccgacgcgggggacggc
gagcgggtggtcggctacgtcgccgacaacgagcacgacgaggcgtcgttcgtcgcccgc
gagatcgaccggctggtcgacaccggcgagtaccgcaacagcgacatcgcggtcttctac
cgcacgaacaaccagtcccgggtcttcgaggacgtgttcctgcgggtcgggatgccctac
aaggtggtcggcggcgtccggttctacgagcgccgcgagatccgggacgcgctggcctac
ctgcgggtgctgtcgaacccggaggacacggtcagcctgcggcgcatcctcaacgtgccc
aagcgcgggatcggggaccgggccgagtccgtcgtggcggagtacgcggagcgggagcgc
acgtcgttcgcccgcgccctgcgcaccgcagccgaggaaccggcgaggctgccggcactg
gccacgcgctcgcagaagaacatcgccgggttcgtccggatgctcgacgagctcggtgag
ctggtcgagcgcggcgacgacaccgcggagatcctggaggcggtctacggccgcaccggg
tacgtggaggagctgcaggcctccgaggacccgcaggacgggacccggatggacaacctg
gcggagctcgtcacggtcgcccgtgagttcgccggggacgccgcggtggccgacctggcg
gtcggcggcgatccggacgccggaggtgcgatcggctccggccccggtcccgacgccgcg
ggcccggacgccaccgacggtcccggcaacgacgacgacaccgacgccggggcgccggag
cccggctcgctcgccgcgttcctggagcgggtcgcgctcgtcgccgacgccgactcgatc
ccggacgacgagtccggtgtggtcacgctgatgaccctgcacacggcgaagggcctcgag
ttcccggtcgtgttcctcaccggctgggaggacggggtcttcccgcacctgcggaccctg
ggggacccgaaggagctggccgaggagcgccggctggcctacgtcggcatcacccgggcc
gagcagcggctctacctgtcccgggcgatcgtgcgctcggcgttcgggcagcccagcacg
aacccggcgtcccggttcctcgacgaggtgccgcccgagctcaccgactggcggcgcacc
gaggagcagctggtggccgagcggccgtcggcgccggtgggccggttcggcttcggccgg
tcgggcggccgtggctccggtgaccgcggggactggaaggtgcccgagcgcagcctcaac
aacacctcgctgcagctcgacgtcggtgaccgggtcaaccacgacaagtacggcctcggc
acggtcgtcgcctcggacggtgtcgggccgcgggcgaccgtgaccatcgacttcgggtcc
ggcgggacggtgcggctgatgctcatcggcggcgtcccgatgcagaagctgtag
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