Pseudonocardia sp. HH130630-07: AFB00_19905
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Entry
AFB00_19905 CDS
T04486
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFB00_19905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phh03400
]
AFB00_19905
Enzymes [BR:
phh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AFB00_19905
DNA repair and recombination proteins [BR:
phh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFB00_19905
Prokaryotic type
AFB00_19905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
ANY08169
UniProt:
A0A1B1ZQY9
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All DBs
Position
4202077..4202757
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AA seq
226 aa
AA seq
DB search
MAAKPLHEVVEAGWAEALAPVAETVTSMGEFLRAEIAAGRRYLPAGANVLRAFQQPFESV
RVLIVGQDPYPTPGHAVGLSFSVAAETRPLPRSLQNIFREYTEDLGHPAPSSGDLTPWTE
QGVLLLNRCLTVAPGEPGSHRNKGWEEITEQAIRTLVDRDADPMVAILWGRDARNLVPLL
TDVPCIESAHPSPMSADRGFFGSRPFSRANDLLEEIGGDPVDWKLP
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaagccgttgcacgaggtcgtcgaggccgggtgggccgaggcgctcgccccg
gtcgccgagaccgtcacgtcgatgggggagttcctgcgggcggagatcgccgccggtcgc
cgctacctgcccgcgggcgcgaacgtgctgcgcgcgttccagcagccgttcgagtccgtc
cgggtgctgatcgtgggccaggacccgtacccgacgcccgggcacgcggtcgggctgtcg
ttctcggtggcggcggagacccgcccgctgccgcgctcgctgcagaacatcttccgcgag
tacaccgaggacctcgggcaccccgcgccgtcctccggcgatctgacgccgtggaccgag
cagggggtgctgctgctcaacaggtgcctcaccgtggcccccggcgagccgggttcgcac
cggaacaagggctgggaggagatcaccgagcaggcgatccggaccctggtcgaccgggac
gccgacccgatggtcgcgatcctctggggccgtgacgcccgcaacctggtcccgctgctg
accgacgtcccgtgcatcgagtcggcccacccctcgccgatgtcggcggaccgcggtttc
ttcggctcgcggccgttcagccgggccaacgacctgctggaggagatcggcggggacccc
gtcgactggaagctgccctga
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