KEGG   Pseudonocardia sp. HH130630-07: AFB00_20485
Entry
AFB00_20485       CDS       T04486                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
phh  Pseudonocardia sp. HH130630-07
Pathway
phh02024  Quorum sensing
phh03060  Protein export
phh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:phh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AFB00_20485
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AFB00_20485
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AFB00_20485
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phh02044]
    AFB00_20485
Enzymes [BR:phh01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AFB00_20485
Secretion system [BR:phh02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AFB00_20485
  Eukaryotic Sec-SRP protein
   AFB00_20485
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA cobW nSTAND3 AAA_22 Zeta_toxin AAA_24 APS_kinase AAA_31 AAA_30 MMR_HSR1 AAA_18 ArsA_ATPase 6PF2K NPHP3_N AAA_16 AAA_33 AAA_26 TsaE Thymidylate_kin NTPase_1 MobB ABC_tran NACHT AAA_25
Other DBs
NCBI-ProteinID: ANY08260
LinkDB
Position
4318991..4320559
AA seq 522 aa
MFDSLSERLGSTLQGLRGKGRLSDADIDATAREIRIALLEADVALPVVRAFITKIKDRAK
GSEVSQALNPAQQVVKIVNEELVAILGGETRRLNLAKEPPTVIMLAGLQGAGKTTLAGKL
ARWLKGQGHTPLLVACDLQRPNAVNQLQIVGERAGVPTYAPHPGATGSGELPEGPGDPVG
VARDGIAHARDKQYDVVVVDTAGRLGVDEELMRQASDIRTAVQPDEVLFVVDAMIGQDAV
TTAEAFRDGVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASNGEKLEDFDVFHPDRM
SSRILGMGDLLTLIEQAEQVFDAEQSAAAAQKIGSGELTLEDFLQQMLQLRKMGPIGNIL
NMLPGANQGQMKAALDQVDDRQIDRLQAIIRGMTPAERDDPKMINASRRLRIANGSGVTV
SDVNDLVNRFYEARKMMKQMAGQFGFGGGRKATKKVPKNARKAKQAKKGRRSGNPANRAG
QSGGPDLSNLPPSLQQLPPGLAGLDQLPPGFDPSKLDFGKKK
NT seq 1569 nt   +upstreamnt  +downstreamnt
gtgttcgactccctctccgagcggctcggatccacgctgcagggtctccgcggcaagggc
cggctctccgacgccgacatcgacgccaccgcgcgcgagatccggatcgcgctgctggag
gcggacgtcgccctgccggtggtccgcgccttcatcacgaagatcaaggaccgggccaag
ggctcggaggtctcgcaggccctgaacccggcccagcaggtcgtgaagatcgtcaacgag
gaactcgtggcgatcctcggcggcgagacccgccggctgaacctggccaaggaaccaccg
acggtcatcatgctggccggtctgcagggtgcgggtaagacgaccctggccggcaagctg
gcccgctggctgaaggggcaggggcacaccccgctgctcgtggcctgtgacctgcagcgg
ccgaacgcggtcaaccagctgcagatcgtcggcgagcgggccggggtgccgacctacgcc
ccgcacccgggcgccaccggctccggcgagctgcccgagggccccggcgacccggtgggc
gtggcccgcgacgggatcgcgcacgcgagggacaagcagtacgacgtcgtcgtcgtcgac
accgcgggccggctcggtgtcgacgaggagctgatgcgccaggcgtccgacatccgcacg
gcggtgcagccggacgaggtgctgttcgtcgtcgacgcgatgatcggtcaggacgcggtc
accaccgccgaggcgttccgcgacggtgtgggcttcaccggtgtcgtcctcaccaagctc
gacggcgacgcccgcggcggtgccgcgctctcggtccgtgaggtcaccggccagccgatc
ctgttcgcctcgaacggggagaagctggaggacttcgacgtcttccacccggaccggatg
tcctcgcgcatcctcgggatgggcgacctgctgaccctgatcgagcaggccgagcaggtc
ttcgacgccgagcagtcggccgcggccgcgcagaagatcggctccggcgagctgaccctg
gaggacttcctccagcagatgctgcagctgcgcaagatgggcccgatcgggaacatcctc
aacatgctccccggcgcgaaccaggggcagatgaaggcggcgctggaccaggtcgacgat
cggcagatcgaccggctccaggccatcatccgcggcatgaccccggccgagcgcgacgac
ccgaagatgatcaacgcgtcccggcggctgcgcatcgcgaacggctccggcgtcaccgtc
tccgacgtgaacgacctggtcaaccggttctacgaagcccgcaagatgatgaagcagatg
gccggtcagttcggcttcggcggcgggcgcaaggccaccaagaaggtcccgaagaacgcg
cgcaaggccaagcaggcgaagaagggccggcgcagcggcaacccggcgaaccgggccggc
cagtccggcggccccgacctgtcgaacctgccgccgagcctgcagcagctcccgccgggg
ctcgccgggctcgaccagctgccgcccgggttcgacccgtcgaagctggacttcggcaag
aagaagtga

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