Pseudonocardia sp. HH130630-07: AFB00_20590
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Entry
AFB00_20590 CDS
T04486
Name
(GenBank) hypothetical protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh02020
Two-component system
phh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AFB00_20590
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AFB00_20590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phh03021
]
AFB00_20590
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
phh02035
]
AFB00_20590
Transcription machinery [BR:
phh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AFB00_20590
Bacterial motility proteins [BR:
phh02035
]
Flagellar system
Flagellar assembly proteins
Stator
AFB00_20590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
KORA
UPF0122
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ANY10243
LinkDB
All DBs
Position
4337583..4338320
Genome browser
AA seq
245 aa
AA seq
DB search
MESDALPLWRVYLARRDPEARRRLVEHHTPLVRGVGAKLAVRLPPSVELADLVQSGTFGL
MEAIDRFDPARGARFEGYAGRRIHGAMLDELRAQDWVPRTVRSRIREVERAREAVQTRTG
RPASERELARELGVGLRDLRQAGRPMHLVSTDDPGAVAAAGPAVLADDDADPVLTAVRRE
TGDELRAAIAQLGERDRTVLRLYYLEDRTLAEIGVLLGVTESRVCQLHSRMISRLRLRLE
PALAG
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtggagagcgacgccctgccgctgtggcgggtctatctcgcgcggcgcgatccggaggcc
cggcgccggctcgtggaacaccacacgccgctcgtgcgcggggtcggggcgaagctcgcc
gtccgcctgcccccgtcggtcgagctggcggacctggtgcagtccggcacgttcggtctc
atggaggcgatcgaccggttcgacccggcccgcggagcgcgcttcgagggctacgccggc
cggcggatccacggtgcgatgctcgacgagctgcgcgcgcaggactgggtcccgcgcacc
gtccgctcccgcatccgggaggtcgaacgggcccgggaggccgtgcagacccggaccggc
cggccggcgtcggagcgggaactggcgcgcgagctgggcgtggggctgcgtgatctccgg
caggccgggcggccgatgcacctcgtcagcaccgacgacccgggcgccgtcgccgcggcc
gggccggccgtcctggccgacgacgacgcggaccccgtcctgaccgccgtccgccgggag
accggcgacgagctgcgggccgccatcgcgcagctcggtgagcgtgaccgcacggtcctg
cggctgtactacctggaggaccgcacgctcgccgagatcggtgtcctgctgggggtgacc
gagtcgcgggtgtgccagctgcactcccggatgatctcgcgcctgcggctgcgcctggaa
ccggcgctcgccggctga
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