Pseudonocardia sp. HH130630-07: AFB00_21195
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Entry
AFB00_21195 CDS
T04486
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phh
Pseudonocardia sp. HH130630-07
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phh03016
]
AFB00_21195 (truB)
Enzymes [BR:
phh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AFB00_21195 (truB)
Transfer RNA biogenesis [BR:
phh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFB00_21195 (truB)
Prokaryotic type
AFB00_21195 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PUA
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ANY08377
UniProt:
A0A1B1ZRI9
LinkDB
All DBs
Position
4457810..4458706
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AA seq
298 aa
AA seq
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MAPRTPPPPPGLVIVDKDRGPTSHDVVGKLRRIMGTRKVGHAGTLDPMATGVLVVGIERA
TKLLGHLSLDTKAYTATVRLGQATDTDDAEGEPLAEPVPVTADEAGVRAAMAVLTGDIMQ
VPSAVSAVKIDGKRAYQRVRDGETVEIPARPVTVSAFELREVRTDGGFLDLDVAVECSSG
TYVRALARDLGAALGVGGHLTALRRTRVGPFTLEHARTVEQLAGDPGLSLDLAAAVDTAF
PRVEVDADAVTDVRTGRSLPAAGVGGTYGVFGPDGAVLALMADRGPSARPVVVLDPAG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtggcaccccgaaccccgcccccgccgcccggactcgtgatcgtcgacaaggaccgtgga
ccgaccagccacgacgtcgtcgggaagctgcgccggatcatgggcacccgcaaggtcggg
cacgccgggacgctcgacccgatggcgaccggcgtgctggtcgtggggatcgagcgggcg
acgaagctgctggggcacctgtcgctggacaccaaggcctacaccgccaccgtccggctc
gggcaggccaccgacaccgacgacgccgagggcgaaccgctcgccgagccggtgccggtg
accgcggacgaggccggcgtccgggcggcgatggccgtgctcaccggcgacatcatgcag
gtcccgagcgcggtgtcggcggtgaagatcgacgggaagcgtgcctaccagcgggtccgc
gacggggagacggtcgagatcccggcccggccggtcaccgtgtccgcgttcgagctgcgc
gaggtgcggaccgacggcgggttcctcgatctcgacgtcgccgtcgagtgctcctcgggg
acctacgtccgggcgctggcccgcgacctcggcgcggcgctgggcgtcggcgggcacctc
acggcactgcgccgcacccgggtcgggccgttcaccctggagcacgcgcggaccgtcgag
cagctcgccggggaccccgggctgtccctggacctggccgccgcggtcgacaccgcgttc
ccccgggtcgaggtcgacgccgacgccgtcaccgacgtccggaccgggcggtcgctgccc
gcggccggggtcgggggcacctacggcgtgttcggcccggacggggccgtgctcgccctg
atggccgaccgtggcccgtccgcgcgcccggtcgtcgtgctcgacccggcgggctga
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