Pseudonocardia sp. HH130630-07: AFB00_21445
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Entry
AFB00_21445 CDS
T04486
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh00020
Citrate cycle (TCA cycle)
phh00190
Oxidative phosphorylation
phh00650
Butanoate metabolism
phh00720
Other carbon fixation pathways
phh01100
Metabolic pathways
phh01110
Biosynthesis of secondary metabolites
phh01120
Microbial metabolism in diverse environments
phh01200
Carbon metabolism
Module
phh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
phh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AFB00_21445 (sdhA)
00650 Butanoate metabolism
AFB00_21445 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
AFB00_21445 (sdhA)
00720 Other carbon fixation pathways
AFB00_21445 (sdhA)
Enzymes [BR:
phh01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AFB00_21445 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
DAO
FAD_oxidored
GIDA
Thi4
FAD_binding_3
Pyr_redox_3
NAD_binding_8
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ANY08413
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Position
4516262..4518187
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AA seq
641 aa
AA seq
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MTDNTGTREQIERHDYDVVVIGAGGAGLRAAIEARMQGKRTAIISKSLFGKAHTVMAEGG
CAASMGNANPNDNWQVHFRDTMRGGKFLNNWRMAELHATEAPDRVWELETYGALFDRTPE
GKISQRNFGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDFAETGDYESRIRVFHECT
ITELFTTDGAISGCFGYFRGDGGFVRFDAPAIVLATGGVGKSYSVTSNSWEYTGDGHALA
LRAGATLINMEFLQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSDGERFMFDYIPEVFR
EQYATSEEEGDRWYTDPDNNRRPPELLPRDEVARAINSEVKAGRGTPHGGVYLDVSTRLK
AEEILKRLPSMHHQFKELADVDITKEPMEVGPTCHYVMGGVEVDPDSAMSRVPGLFAAGE
VAGGMHGSNRLGGNSLSDLLVFGRRAGLHAAQHSARGRPAVVETDVAAALDRALLPFSTS
AEGGENPFVVQQELQKTMHELVGIIRKEDEMEMALKKLEDIATRTRTVSVEGHRRFNPGW
HLALDLRNMLLVSLCVGKAALERQESRGGHTRDDFPVMDSDWRHLLLVCTALGEDGIELT
RQEQLAMRPDLFDLFELDELKKYYTGDELGGHRSDSAEGTR
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaacaccgggacgcgcgagcagatcgagcggcacgactacgacgtcgtggtc
atcggggccgggggtgcgggcctgcgggcggcgatcgaggcccgcatgcagggcaagcgc
accgcgatcatctcaaagtcgctgttcggcaaggcgcacaccgtcatggccgagggcgga
tgcgcggcgtcgatgggcaacgcgaacccgaacgacaactggcaggtccacttccgcgac
accatgcggggcgggaagttcctcaacaactggcggatggccgagctgcacgccacggag
gccccggaccgggtctgggagctggagacctacggcgcgctgttcgaccgcacgcccgag
gggaagatcagccagcggaacttcggcgggcacacctacccgcggctggcgcacgtcggt
gaccggaccggcctggagctgatccgcacgctgcagcagaaggtggtgtcgctgcagcag
gaggacttcgccgagaccggtgactacgagtcccggatccgggtgttccacgagtgcacg
atcaccgagctgttcaccaccgacggcgccatctccggctgcttcggctacttccgcggt
gacggcggtttcgtccggttcgacgccccggcgatcgtcctggcgaccggtggggtcggc
aagagctactcggtcacgtcgaactcctgggagtacaccggcgacggccacgcgctggcc
ctgcgcgccggcgcgacgttgatcaacatggagttcctgcagttccaccccaccgggatg
gtctggccgccgtcggtgaaggggatcctggtcaccgagtcggtccgcggggacggcggg
gtgctgcgcaactccgacggcgagcggttcatgttcgactacatcccggaggtcttccgg
gagcagtacgccacctccgaggaggagggcgaccgctggtacaccgacccggacaacaac
cggcgcccgccggagctgctgccccgtgacgaggtggccagggcgatcaactccgaggtc
aaggccggtcgcggcaccccgcacggcggggtctacctggacgtctcgacccggctcaag
gccgaggagatcctcaagcggctcccgtcgatgcaccaccagttcaaggagctggccgac
gtcgacatcaccaaggagccgatggaggtcggcccgacctgtcactacgtgatgggcggg
gtcgaggtcgacccggactcggcgatgtcgcgggtgccgggcctgttcgccgcgggcgag
gtcgcgggcggcatgcacggctcgaaccgcctcggcgggaactcgttgtcggacctgctg
gtgttcggccgccgggccggcctgcacgcggcgcagcactccgcccgggggcgcccggcc
gtcgtcgagaccgacgtcgccgccgcgctggaccgcgcgctgctgccgttctcgacctct
gcggaggggggtgagaacccgttcgtcgtccagcaggagctgcagaagacgatgcacgag
ctcgtcggcatcatccgcaaggaggacgagatggagatggccctcaagaagctggaggac
atcgccacccgtacgcggacggtctcggtcgaggggcaccggcggttcaaccccggctgg
cacctggcgctggacctgcggaacatgctgctggtctcgctgtgcgtcgggaaggccgcg
ctggagcgccaggagtcgcgcggcgggcacacccgcgacgacttcccggtcatggactcc
gactggcgccacctcctgctggtgtgcaccgcgctgggtgaggacggcatcgagctgacc
cgccaggagcagctcgcgatgcgtccggacctgttcgacctcttcgaactcgacgaactc
aagaagtactacacgggcgacgagctgggcgggcaccgctcggactccgcggagggcacc
cgatga
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