Pseudonocardia sp. HH130630-07: AFB00_22880
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Entry
AFB00_22880 CDS
T04486
Name
(GenBank) preprotein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh02024
Quorum sensing
phh03060
Protein export
phh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AFB00_22880
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AFB00_22880
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFB00_22880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phh02044
]
AFB00_22880
Secretion system [BR:
phh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AFB00_22880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
ANY10313
UniProt:
A0A1B1ZX20
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All DBs
Position
complement(4801699..4803963)
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AA seq
754 aa
AA seq
DB search
MVALAVLAVSAVVALTTAPTLGLDLRGGTQIVLETRDTEEVPADAAATDRVLEVLRGRVD
GLGVAEPSLTRSGENRIIVELPGLTDPAEAADTLGRTAQLRMHPVGVPGAPGGTPTVDET
GQPLQIGPAALQGDMIASAQAVPSQQSVGFEVQIGFDGEGPARWQALTGEAACAPSGAPQ
RRVAIVLDDQVISSPQVVEDIPCGVGMVGGQTTITGNFSQEQASELAVLVEGGALPVPVE
IIEQRTVGPTLGADAISASAWAAIIGSALTAVFLVVVYRLVGLVAVVALGGYALIAYAVQ
TGLGATLTLPGLAAFVLAVGMAVDANVLIAERSREEYALRPRLDRASEAGYRHSLSAVGD
VAVTSLLAAVLLFGLASGPVRGFGVTLVIGVVVSLFSALVLSRLLTLAVLRIPAVRRRPR
LSGIAAIGPVRTRLESRDPGFLRNAGKVLAVAGVVLVVATSGLFVRGLELGVEFTGGRLV
EFTTANEITAEQARAAVTAAGYPDLQVTTTGDGAVGLRSGQLDDAAVAALRESVGAAGGG
AEVLRDEMIGPSLGAELARGGIIALAVALAAQFVYLAFRFRWTFGAGAVAALLANVLVVV
GVFAWTGRPVDGVFLAALLTVIGYSVNDTVVVFDRVREHWAARAGEPFHRVVGSAVLSTL
PRTVNTGISTLVILAMLLFLGGATLADFALALIVGIVVGTVSTIVVAGPVAILLQRRWGQ
APPRTGRDRQPVGKSGRRSGRAGRDRARGDGAVV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcgctcgccgtgctcgccgtgtccgccgtcgtcgccctcaccaccgcccccacg
ctgggcctggacctgcgcggtggcacccagatcgtcctggagacccgggacaccgaggag
gtgcccgccgacgccgccgccaccgaccgggtgctggaggtcctgcgcggccgggtcgac
ggcctcggcgtcgccgagccgtccctcacccgttccggggagaaccggatcatcgtcgag
ctgccggggctgaccgacccggccgaggccgccgacacgctcggccgcaccgcgcagctg
cggatgcacccggtgggtgtgcccggggccccgggcggcacgccgacggtcgacgagacc
gggcagccgctgcagatcggcccggccgccctgcagggcgacatgatcgcctcggcgcag
gccgtgccgtcgcagcagtcggtcgggttcgaggtgcagatcggtttcgacggcgagggg
ccggcccgctggcaggcactcaccggcgaggccgcctgcgccccgtccggcgcgccgcag
cgccgggtcgcgatcgtgctcgacgaccaggtgatctcctcgccgcaggtggtcgaggac
atcccgtgcggggtcggcatggtcggcgggcagacgaccatcaccggcaacttctcccag
gaacaggcctccgagctggccgtactcgtcgagggcggcgcgctgccggtcccggtcgag
atcatcgagcagcggaccgtcggcccgacgctgggcgccgacgcgatctccgcgagcgcc
tgggccgcgatcatcggctccgcactcaccgcggtgttcctggtcgtcgtctaccggctc
gtggggctggtcgccgtcgtggcgctgggcgggtacgcgctgatcgcctacgcggtgcag
accgggctcggggccacgctgaccctgccggggctggccgcgttcgtgctcgccgtcggt
atggccgtcgacgccaacgtgctcatcgccgaacgctcccgggaggagtacgcgctgcga
ccacggctggaccgggcgtcggaggccggttaccggcactcgctgtccgcggtcggtgac
gtcgccgtcacctcgttgctcgccgcggtgctgctgttcgggctggcgtccgggccggtc
cgcggcttcggggtcacgctggtcatcggcgtcgtggtgtcgctgttctcggcgctggtg
ctctcccggctcctcaccctcgccgtgctccggatcccggccgtgcgacggcggccgcgg
ctgtccgggatcgcggcgatcggcccggtccgcacccggctggagtcccgggaccccggc
ttcctgcgcaacgcgggcaaggtgctggcggtcgccggcgtcgtgctggtggtggcgacc
agcgggctgttcgtccgcggcctggagctcggggtggagttcaccggcggccggctcgtc
gagttcacgacggcgaacgagatcaccgccgagcaggccagggccgccgtcaccgcggcc
ggctaccccgacctgcaggtcaccacgaccggcgacggcgcggtcgggctgcgctccggg
cagctggacgacgccgcggtcgccgcgctgcgcgagtccgtcggcgcggccggcggcggc
gcggaggtgctgcgcgacgagatgatcggcccgagcctcggcgccgagctcgcccgcggc
ggcatcatcgcgctcgccgtggccctggcggcgcagttcgtctacctggcgttccggttc
cgctggacgttcggcgccggggcggtcgcggcgctgctcgcgaacgtcctcgtcgtggtc
ggggtgttcgcctggaccgggcgaccggtcgacggcgtgttcctcgccgcgctgctcacc
gtcatcgggtactcggtgaacgacaccgtggtggtgttcgaccgggtccgggagcactgg
gcggcgcgggcgggcgaaccgttccaccgggtggtcggctccgccgtgctgtccacgctg
ccgcgcacggtgaacaccggcatctcgacgctggtgatcctggcgatgctgctgttcctg
ggcggcgcgacgctggccgacttcgcgctggcgctgatcgtgggcatcgtggtcgggacg
gtgtcgacgatcgtcgtcgccgggccggtcgcgatcctgctgcagcggcggtggggacag
gcgccgccgcggaccgggcgggaccggcagccggtcggcaagtccgggcgccgctcgggg
cgggccgggcgggatcgggcccggggcgacggcgccgtggtctga
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