Pseudonocardia sp. HH130630-07: AFB00_23245
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Entry
AFB00_23245 CDS
T04486
Symbol
cobN
Name
(GenBank) cobalamin biosynthesis protein CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh00860
Porphyrin metabolism
phh01100
Metabolic pathways
phh01240
Biosynthesis of cofactors
Module
phh_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
AFB00_23245 (cobN)
Enzymes [BR:
phh01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
AFB00_23245 (cobN)
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Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
ANY08695
UniProt:
A0A1B1ZSN2
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Position
4874761..4878372
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AA seq
1203 aa
AA seq
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MILLLSTSDTDLLSARASGADYRLANPNRVTHDELAAMAEAADVVVVRVLGGYRYFEEGL
DLLRGGATPLVCLGGEMAPDAEMMELSSVPAGVAAQAHTYLAQGGTGNLAQLHAFLSDTV
LLTGEGFEPPVELPEWGVLDRDGTPADTPADGPTVAVLFYRAQFLAGNTRYIEALCDAIT
AKGGRALPIWCASLRQAPAALLERLRDADAMIVTVLAAGGTKPASAQAGGEDEEWDVTAL
AALDVPILQGLCLTSSRSTWEDNDDGMSPLDVATQVAVPEFDGRLITVPFSFKEIDDDGL
SVYVPDTERAARVAGIAVNHANLGRVPNADKKIVVMLSAYPTKHARIGNAVGLDTPASVV
ALLRTMAAAGYDTGEFPGVEAGDGDALMHALISAGGQDPNWLTEEKLAGNPIRISSPVYR
RWFDTLPEDFRSGVEEHWGAAPGEHYVSNGDIVVAALRSGNVTVIVQPPRGFGENPVAIY
HDPDLPPSHHYLAAYRWLAAPASEGGFGAHAIVHVGKHGNLEWLPGKTLGMSASCGTDAV
LGDLPLIYPFLVNDPGEGTQAKRRAHATLVDHLIPPMARAESYGDIARLEQLLDEHANIS
ALDPAKLPAIRQQIWTLMTAAQMHHDLGLEQRPDEEVFDDMLMNVDGWLCEIKDVQIRDG
LHVLALAPSGEQRVDLVLAMLRARQMWGGEQSVPGLRQALGLVEDGSESNARTDAVEQVA
RALVAGMEAAGWSADAAPSVLARAGQLPPGSDPAAVETILRFAAEEVVPRLDATAHELDQ
VLHALDGGFVPAGPSGSPLRGLINVLPTGRNFYSVDPKAVPSKLAWETGQAMAESLVERY
RADHGEYPRSVGLSVWGTSAMRTSGDDVAEVFALLGVRPVWDDASRRVRDLEVIDLAELG
RPRVDVTVRISGFFRDAFPHVLALLDDAVALVADLDEGPEQNFVRSHVAVDRERHGDDRR
ARTRIFGSKPGTYGAGLLQLVDSRDWRGDADLAEVYSTWGGYAYGRGLDGVPARDDMENA
YRRIAVAAKNIDTREHDIADSDDYYQYHGGMVATVRALTGSAPAAYVGDSTRPESVRTRS
LHEETARVFRARVVNPRWIAAMRRHGYKGAFEMAATVDYLFGWDATTGVIADWQYETLTA
EYVLDPENRKFLTESNPWALHGMAERLLEAVDRGLWESPEAGTLDALRQAYLESEGDLED
DGS
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
gtgatcctcctcctgtcgacctcggacaccgacctgctctccgcccgcgcctcgggtgcg
gactaccggctcgcgaacccgaaccgggtcacccacgacgagctggccgcgatggcggag
gcggccgacgtcgtcgtcgtgcgggtgctcggtggctaccggtacttcgaggagggcctg
gacctgctccgcggcggcgcgacgccgctggtctgcctcggcggcgagatggcgccggac
gcggagatgatggagctgtcgtcggtcccggccggggtcgccgcccaggcgcacacctac
ctcgcccagggcgggaccgggaacctcgcccagctgcacgcgttcctgtccgacaccgtg
ctgctcaccggcgagggcttcgagcccccggtcgagctgcccgagtggggcgtcctcgac
cgcgacgggacgccggccgacacgccggccgacgggccgacggtcgcggtgctcttctac
cgagcccagttcctcgccgggaacacccgctacatcgaggcgctctgcgatgcgatcacg
gcgaagggcggccgggcgctgccgatctggtgcgcctcgctgcgccaggccccggccgcg
ctgctggaacgcctgcgcgacgccgacgccatgatcgtgacggtgctggccgcgggcggg
accaagccggcgtccgcgcaggccggcggcgaggacgaggagtgggacgtcaccgcgctc
gccgcgctcgacgtcccgatcctgcagggactgtgcctgaccagctcgcgcagcacctgg
gaggacaacgacgacgggatgtccccgctcgacgtcgccacccaggtcgccgtccccgag
ttcgacggccggctgatcaccgtcccgttctcgttcaaggagatcgacgacgacgggctg
tcggtctacgtcccggacaccgagcgggccgcccgggtcgccgggatcgcggtgaaccac
gcgaacctgggccgggtcccgaacgcggacaagaagatcgtcgtgatgctctcggcgtac
ccgaccaagcacgcgcggatcggcaacgccgtcggcctggacacccccgcgtcggtcgtc
gcgctgctgcgcaccatggccgcggcgggctacgacaccggggagttccccggcgtcgag
gccggggacggcgacgccctcatgcacgcgctgatctccgccggcggtcaggacccgaac
tggctgaccgaggagaagctggccggcaacccgatccgcatctcgtcgccggtgtaccgg
cgctggttcgacacgctgccggaggacttccgctccggcgtcgaggagcactggggcgcc
gcgcccggcgagcactacgtctcgaacggcgacatcgtcgtcgcggcgctgcggtcgggg
aacgtgaccgtgatcgtgcagccgccgcgcgggttcggggagaacccggtggcgatctac
cacgatccggacctgccgccgtcgcaccactacctcgccgcctaccgctggctcgccgct
cccgcgtcggaggggggcttcggtgcgcacgcgatcgtgcacgtcggcaagcacggcaac
ctggagtggctgcccggcaagacgctggggatgtcggcgtcctgcgggaccgacgccgtg
ctcggcgacctgccgctgatctacccgttcctggtcaacgacccgggggaggggacccag
gccaagcgccgcgcgcacgcgacgctggtcgaccacctcatcccgccgatggcccgtgcc
gagagctacggcgacatcgcgcgactggagcagctgctcgacgagcacgccaacatctcc
gccctcgacccggcgaagctgcccgcgatccgccagcagatctggacgctgatgaccgcg
gcccagatgcaccacgacctcggcctggagcagcgtccggacgaggaggtcttcgacgac
atgctcatgaacgtcgacggctggctgtgcgagatcaaggacgtccagatccgggacggc
ctgcacgtactcgcgctggccccgtccggcgagcagcgggtcgacctggtcctggccatg
ctgcgggcccggcagatgtggggtggcgagcagtccgtgccgggcctgcgccaggcgctc
ggcctcgtcgaggacgggtcggagtcgaacgcgcgcaccgacgccgtcgagcaggtcgcg
cgggcactggtcgccgggatggaggcggccggctggtccgccgacgcggccccgtccgtg
ctcgcccgggcggggcagctgcccccgggcagcgatcccgccgccgtcgagacgatcctg
cggttcgccgccgaggaggtcgtgccccggctggacgccaccgcgcacgagctggaccag
gtgctgcacgccctggacggcgggttcgtcccggccgggccgtccggctcgccgctgcgc
gggctgatcaacgtgctcccgaccgggcggaacttctactccgtcgacccgaaggcggtg
ccgtccaagctcgcctgggagaccggtcaggcgatggccgagtcgctggtcgagcggtac
cgggccgaccacggcgagtacccgcgcagcgtcgggctgtcggtgtgggggacgagcgcc
atgcgcacctccggcgacgacgtcgccgaggtgttcgcactgctcggcgtccgcccggtc
tgggacgacgcgtcgcgccgggtgcgcgacctggaggtgatcgacctcgcggagctgggc
cggccgcgggtcgacgtcacggtgcggatctccgggttcttccgggacgcgttcccgcac
gtgctcgccctgctcgacgacgcggtggcgctggtcgccgatctcgacgagggcccggag
cagaacttcgtccggtcccacgtcgccgtggaccgggagcggcacggcgacgaccgccgg
gcacgcacccggatcttcgggtccaagccgggcacctacggcgccgggctgctgcagctg
gtcgactcccgggactggcggggcgacgccgacctcgccgaggtgtactccacctggggc
ggctacgcctacggccgcgggctcgacggtgtccccgcgcgggacgacatggagaacgcc
taccggcggatcgcggtcgcggcgaagaacatcgacacccgcgagcacgacatcgccgac
tccgacgactactaccagtaccacggcggcatggtcgccacggtgcgcgcgctgaccggc
tcggcccccgcggcctacgtgggcgactcgacccgccccgagtcggtgcgcacccgcagc
ctgcacgaggagacggcccgggtgttccgggcccgggtggtcaacccgcggtggatcgcc
gcgatgcgccggcacggctacaagggcgcgttcgagatggccgcgaccgtggactacctg
ttcgggtgggacgcgacgacgggcgtgatcgcggactggcagtacgagacgctgaccgcg
gagtacgtgctcgacccggagaaccgcaagttcctcaccgagtccaacccgtgggcgttg
cacgggatggccgagcggttgctcgaagccgtggaccgggggctgtgggagtcgccggag
gcgggcacgctggacgcgttgcggcaggcgtacctggagtccgagggggacctggaggac
gacgggtcctga
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