Pseudonocardia sp. HH130630-07: AFB00_23550
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Entry
AFB00_23550 CDS
T04486
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AFB00_23550 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
phh03011
]
AFB00_23550 (rpsA)
Ribosome [BR:
phh03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AFB00_23550 (rpsA)
Bacteria
AFB00_23550 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
DUF2110
Motif
Other DBs
NCBI-ProteinID:
ANY08747
LinkDB
All DBs
Position
4943562..4945064
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AA seq
500 aa
AA seq
DB search
MSTDTTAAPTTPQVAINDIGSEEDFLAAIDLTIKYFNDGDIVEGTIVKVDRDEVLLDIGY
KTEGVIPSRELSIKHDVDPAEVVEVGEFVEALVLQKEDKEGRLILSKKRAQYERAWGTIE
ALKEADEPVEGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRKIEAKIIELD
KNRNNVVLSRRAWLEQTQSEVRSEFLNQLQRGQVRKGVVSSVVNFGAFVDLGGVDGLVHV
SELSWKHIDHPSEVVEVGQEVTVEVLDVDLDRERVSLSLKATQEDPWRLYARTHAIGQIV
PGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPEQVVQVGDDAMVKVIDIDLDRRR
ISLSLKQANEGMTVDTEFDPTRYGMAAEYDDQGNYIYPEGFDVDSGDWKEGYDEARAAWE
KQYAEAHARFEQHIGQIRKAAEAEAEGGDDIAPANYSSGGGEERSSSAGTSTGGGQAESG
GSLASDEQLAALREKLSGGA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgacaccaccgccgccccgaccacgccgcaggtcgctatcaacgacatcggg
tcggaggaggacttcctcgcagccatcgacctgacgatcaagtacttcaacgatggcgac
atcgtcgagggcaccatcgtcaaggtcgaccgtgacgaggtcctgctcgacatcggctac
aagaccgagggcgtcatcccctcgcgggagctgtcgatcaagcacgacgtcgaccccgcc
gaggtcgtcgaggtcggcgagttcgtcgaggccctcgtcctccagaaggaggacaaggaa
ggccgcctgatcctgtccaagaagcgcgcgcagtacgagcgcgcctggggcacgatcgag
gccctcaaggaggccgacgagccggtcgagggcaccgtcatcgaggtcgtcaagggcggc
ctcatcctggacatcgggctccggggcttcctgccggcctcgctggtcgagatgcgccgc
gtccgcgatctgcagccgtacgtcggccgcaagatcgaggccaagatcatcgagctggac
aagaaccgcaacaacgtggtcctgtcccgccgcgcctggctggagcagacccagtccgag
gtccgcagcgagttcctcaaccagctgcagcgcggtcaggtccgcaagggcgtcgtctcc
tcggtggtcaacttcggcgcgttcgtcgacctgggcggggtcgacggcctggtgcacgtc
tccgagctgtcctggaagcacatcgaccacccctccgaggtcgtcgaggtcggccaggag
gtcaccgtcgaggtcctcgacgtggacctggaccgcgagcgcgtctccctgtcgctgaag
gcgacccaggaggacccgtggcggctctacgcccggacccacgcgatcggccagatcgtg
ccgggcaaggtcaccaagctcgtcccgttcggtgcgttcgtccgcgtcgaggagggcatc
gagggcctggtccacatctccgagctggccgagcgccacgtcgaggtgccggagcaggtc
gtccaggtcggcgacgacgccatggtcaaggtcatcgacatcgacctcgaccgccggcgg
atctcgctatcgctgaagcaggccaacgagggcatgacggtcgacaccgagttcgacccg
acgcgctacggcatggccgctgagtacgacgaccaggggaactacatctaccccgagggc
ttcgacgtcgactccggcgactggaaggaaggctacgacgaggcccgcgccgcctgggag
aagcagtacgccgaggcgcacgcccgcttcgagcagcacatcgggcagatccgcaaggcc
gccgaggccgaggcggagggtggcgacgacatcgcgccggccaactactcctcgggtggc
ggtgaggagcgctcctccagcgccggcaccagcaccggtggtggccaggccgagtcgggc
ggctcgctcgcgagcgacgagcagctcgccgcgctgcgggagaagctctccggcggagcc
tga
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