Pseudonocardia sp. HH130630-07: AFB00_24730
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Entry
AFB00_24730 CDS
T04486
Name
(GenBank) hypothetical protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02034
peptide/nickel transport system permease protein
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFB00_24730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phh02000
]
AFB00_24730
Transporters [BR:
phh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AFB00_24730
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
BPD_transp_1
oligo_HPY
AAA_21
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANY08937
LinkDB
All DBs
Position
complement(5192203..5194215)
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AA seq
670 aa
AA seq
DB search
MSTDATASSGGEPAARRAARVAWLLRRPGILACLAWIGLVFLTSSVARLLSLGAPLEQDL
ADSLAGPSAEHPLGTDQLGRDVLDRLLFGGWETLLSAALAVVIAVALGTALGLLAGYVGG
IVDTVVNWLQDILITLPTILVLLAVATVLGNDIWAAMTVLGVLMSATFIRLVRSLTRSVR
EELYVDAARVSGLSNVRILGRHILPNAVGPVFIQGSAALGTAVVVQAGLGFLGLGAPPPY
PSWGGMISEAASSISLQPWLLVPSGLMIVLTVLALNLLGDYLRDEMYASRRGRGDAAQRT
RAHRRAAEELARREVVPDPTDDTRHGGVLRVRDLRVSFPRDGGFVDVVSGLDLDIAPGEA
VGLVGESGCGKTMTGLSLLGRVPSPGVISGHIEIDGRRVATHDGSFAARRGRDVALISQE
PMVALDPVFTVGSLLEEVLRGHGHDRAGARARSAELLELVGIPRVGAVLRSYPHQLSGGM
AQRVSIAVALAGEPRLLVADEPTTALDVTVQAEILELLRRLQTELGMALLFITHDLGVIA
DICTRTVVMYAGEIVEQGPVEDLFDAPRHPYTGALLAATPQVDDEHDPVGIPGVVPPPGR
WPEHCRFAGRCSFATERCRSGPAVLQPAGPQRLHRCLRSAELVAERGDVAPHRSPIPTEP
GPAPVEVSSS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgacgccaccgcgtcctccggcggggagccggccgcgcgccgcgccgcgcgt
gtcgcctggctgctgcgccgcccggggatcctggcctgcctggcgtggatcgggctcgtc
ttcctgacgagcagcgtggcccggctcctgtccctcggggcaccgctggagcaggatctc
gcggactccctggccggcccgagcgcggagcatccgctgggcaccgaccagctcggccgt
gacgtgctggaccggctgctgttcggcggctgggagaccctgctcagcgccgccctcgcc
gtcgtcatcgcggtcgcgctcggcaccgcgctcggcctgctcgccggctacgtcggcggg
atcgtcgacaccgtcgtgaactggctgcaggacatcctgatcaccctgcccacgatcctg
gtgctgctcgcggtggccacggtgctgggcaacgacatctgggccgcgatgacggtgctc
ggcgtgctcatgtcggccaccttcatccggttggtccgctcgctgacccggtcggtacgg
gaggagctctacgtcgacgcagcccgggtgtccggactgtcgaacgtgcggatcctgggc
cggcacatcctgcccaacgccgtcggccccgtgttcatccagggctcggcggcactcggg
acggcggtcgtggtccaggccgggctcggcttcctcgggctgggtgccccgcccccgtac
ccgagctggggcgggatgatctccgaggcggcgagctcgatcagcctgcagccgtggctg
ctcgtcccctccggcctgatgatcgtgctgacggtgctcgcgctcaacctgctcggggac
tacctgcgcgacgagatgtacgcgtcccggcgcggccgcggtgacgccgcgcagcgcacc
cgggcgcaccgtcgggcggccgaggagctggcccggcgcgaggtcgtgccggacccgacc
gacgacacccgccacggcggcgtgctgcgggttcgtgacctgcgggtctccttcccccgc
gacggtggcttcgtcgacgtcgtctcgggactcgatctcgacatcgcccccggcgaggcg
gtcggtctcgtcggcgagtccggctgcggcaagacgatgaccgggctgagcctgctcggc
cgggtgccctccccgggggtgatcagcggtcacatcgagatcgacgggcgccgggtcgcc
acccacgacggctcgttcgccgcccggcgcgggcgcgacgtcgcgctgatctcgcaggaa
ccgatggtggcgctggacccggtcttcaccgtgggcagcctcctggaggaggtcctgcgc
gggcacgggcacgatcgcgcgggtgcccgcgcccggtccgccgagctgctggagctggtc
ggcatcccgcgggtcggcgccgtcctgcggtcctacccgcaccagctctccggtggcatg
gcccagcgggtgtccatcgccgtggcgctggccggggaaccccggctgctggtcgcggac
gagccgaccaccgccctggacgtgaccgtccaggccgagatcctcgagctgctgcgccgg
ctgcagaccgagctcgggatggcgctgctgttcatcacccacgacctcggcgtcatcgcc
gacatctgcacccgcaccgtcgtcatgtacgccggcgagatcgtcgagcaggggcccgtc
gaggacctgttcgacgcgccgcgccacccgtacacgggcgccctgctcgccgcgaccccg
caggtggacgacgagcacgacccggtcggcatccccggtgtcgtcccgccgcccggccgg
tggcccgagcactgccgcttcgccggtcgctgctccttcgcgaccgagcggtgccggtcc
gggcccgcggtcctgcagccggccggtccgcagcgcctgcaccgctgcctgcgctcggcg
gagctggtcgccgaacggggcgatgtggcgccgcaccggtcaccgatcccgaccgagccg
ggtcccgccccggtggaggtgagctcgtcatga
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