Pseudonocardia sp. HH130630-07: AFB00_26580
Help
Entry
AFB00_26580 CDS
T04486
Name
(GenBank) ABC transporter ATP-binding protein
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AFB00_26580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phh02000
]
AFB00_26580
Transporters [BR:
phh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
AFB00_26580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_16
ABC_membrane
SMC_N
AAA_22
AAA_29
AAA_33
IGPD
DUF87
AAA_5
AAA_28
Zeta_toxin
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ANY09219
LinkDB
All DBs
Position
5599104..5600858
Genome browser
AA seq
584 aa
AA seq
DB search
MGRRHRPRRAGRPGRAGHRREHTVSGHPAPTAPRGAWSLAADVLRPRLRGVLGGAVLGAL
ATLCGAGLLALAAWLLATAAQHPSVTALSVAVVLTRALGVGRGVTRYAERLVGHDAALRA
LADLRGRVYARLAATEPVRRFSAGDLVSRLVTDTDSVQDLVVRAAVPVVAAALAGSGAVL
LATVLLVPGGALLAGGLLVAGVAVPALTAALSRGPAARAARARTELSAGLVDLLDGAAEL
FANGATGDAVRAVERADAELTRTARRDAALLGLGAGSGALVAGLTVAATLLLGVAAVDAG
TLAAVPLAVLVLTALAAFEVVAPLPAAAARLATVRAGLSRLVPVLGAAPAVAHREPADEP
LPGHGDLRIRGLTVAHPGPGGAPGRAVLRDLDLDLPAGARVALVGASGSGKSTLAAVLFR
FLDPRSGTVTLGGQDLLRRPPAQVRAVISGVPADPHVFDSTVRENLRLAVPGDADPPTDE
ALGAVLRRVGLGDLDLDHAVGAHGTRLSGGMRRRLALARALLVDPAVLVLDEPTAHLDPD
TRDAVLDDLLAATTGRSVLLITHDPAVLDRMDAVHVLRDGRVRS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
gtgggccgccgtcaccgaccgcgtcgtgcgggtcggccgggccgggcgggtcaccgccgg
gagcacaccgtgagcgggcaccccgcccccaccgcgccccgcggagcgtggtccctcgcg
gcggacgtcctccggccccggctgcggggtgtgctcggcggcgcggtgctgggtgcgctg
gcgacgctctgcggtgcggggctgctcgcactcgcggcgtggctgctggcgaccgccgcc
cagcacccgtcggtgacggcgctgtcggtggccgtcgtcctcaccagggcgctcggcgtc
ggccgcggcgtcacccgctacgccgagcggctggtcgggcacgacgcggcgctgcgggcg
ctggccgacctgcgcggccgggtctacgcccggctcgccgccaccgagccggtccgccgg
ttctccgcgggggacctggtgtcgcggctggtcaccgacaccgactcggtgcaggacctg
gtggtgcgcgccgccgtcccggtcgtcgccgcggcgctcgccgggtcgggcgccgtgctg
ctggcgaccgtgctgctggtgcccggcggggcgttgctcgccggtggcctgctcgtcgcc
ggggtcgcggtgcccgcactcaccgcggccctgtcccggggcccggccgcgcgggccgcc
cgggcccgcaccgaactctcggccgggctggtcgacctgctcgacggcgcagcggagctg
ttcgccaacggcgccaccggcgacgccgtccgggccgtcgagcgggccgacgccgagctg
acccgcaccgcccgccgggacgccgccctgctcggtctcggcgccggttcgggggccctc
gtcgccgggctcaccgtggccgcgacgctgctgctcggcgtggccgccgtcgacgcgggc
accctggcggccgtgccgctggcggtgctcgtcctcaccgcgctcgccgcgttcgaggtc
gtcgcgccgctgccggccgccgcggcccggctcgccaccgtgcgggcggggctgtcccgg
ctggtcccggtgctgggtgcggccccggccgtcgcgcaccgcgagcccgccgacgagccg
ctgcccggccacggcgacctgcggatccgcggcctcaccgtcgcccaccccgggcccggc
ggcgcaccgggccgcgccgtgctccgggatctcgacctggacctcccggcgggcgcccgg
gtcgcgctcgtcggggccagcggttccggcaagtcgacgctggccgcggtgctgttccgc
ttcctcgacccgcgctccggcacggtgaccctcggcgggcaggacctgctccggcgaccg
ccagcgcaggtcagggccgtgatctccggggtcccggccgacccgcacgtgttcgactcc
acggtgcgggagaacctgcggctcgccgtgcccggggacgccgacccgcccaccgacgag
gccctgggcgccgtactgcgccgggtcggtctcggcgacctggacctcgaccacgccgtc
ggcgcgcacgggacgcggctctccggcggcatgcggcggcggctcgcgctggccagggcg
ctgctcgtcgacccggccgtgctcgtcctcgacgagccgaccgcgcatctcgacccggac
acccgcgacgccgtcctcgacgacctgctggccgcgacgaccggacgctcggtcctgctc
atcacgcacgacccggccgtcctggaccggatggacgcggtgcacgtcctgcgcgacgga
cgggtccggagctga
DBGET
integrated database retrieval system
