Pseudopodoces humilis (Tibetan ground-tit): 102099248
Help
Entry
102099248 CDS
T02921
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102099248 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102099248 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
phi03019
]
102099248 (SUPT5H)
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
102099248 (SUPT5H)
RNA polymerase I system
102099248 (SUPT5H)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
102099248 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW7_SPT5
KOW2_Spt5
KOW5_SPT5
KOW6_SPT5
Spt5-NGN
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
102099248
NCBI-ProteinID:
XP_014118229
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MSDSEDSNFSEDESERSSDDGDDNEAEEQRGGGSGKEEAEEEEEEEEEEEEEEYDEEEEE
EEDDDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDR
SGARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNL
WTVKCKIGEERATAVALMRKFIAYQYTETPLQIKSVVAPEHVRGYLYVEAYKQTHVKQAI
EGVGNLRLGYWNQQMVPIKEMTDVLKVVKEVTNLKPKAWVRLKRGIYKDDIAQVDYVEPS
QNQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFL
IFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHN
LQPGDNVEVCEGELINLQGKILSVDGNKVTILPKHEDLKDMLEFPAQELRKYFRMGDHVK
VIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGEL
VQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDI
VKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFAM
CGFVPMSPRISSPMHPSGGGQRGGFGAGGLSRGRGRRDNDLIGQTVRISQGPYKGYIGVV
KDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGLTSAYGRTPMYGSQTPMYGSGSRT
PMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFEDEP
TPSPQGYGGTPNPQTPGYPDPASPQVSQPYNPQTPGTPAMYNTEQFSPYAVPSPQGSYQP
SPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQVPPDPSPVGYSPMTPGAPSPGGYN
PHTPGSGIEPSAGDWVTTDIQVKVRESYLDSAAVGQTGVIRSVTGGMCSVYLKDSEKVVS
VSSEHLEPVTPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLEEQLKILNLRFLGKL
LEA
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaacttctcggaggacgagagcgagcgcagcagcgacgac
ggggacgacaacgaggccgaggagcagcgcggggggggcagcgggaaggaggaggcggag
gaggaggaggaggaggaggaagaggaagaggaggaggagtacgatgaggaggaggaggag
gaggaagacgacgatcggccggccaagaaaccgcggcacggggggttcattctggacgag
gccgatgtggatgatgagtacgaggatgaagatcagtgggaggatggggccgaggacatc
ctggagaaagaggagatcgaagcctccaacatcgacaacgtggtgctggacgaggatcgc
tccggggcccggcggctgcagaacctctggagggaccagcgtgaggaggagctgggcgag
tactacatgaagaaatacgccaagtcctcggtgggggagacagtttacggcggctccgac
gagctctcggatgacatcacccagcagcagctgctgcccggcgtcaaggaccccaatctc
tggacggtgaagtgcaagatcggggaggagcgcgccaccgccgtcgcgctcatgcgcaag
ttcatcgcgtaccagtacaccgagacgccgctgcagatcaagtcggtggtggcccccgag
cacgtgcgggggtacctgtacgtggaggcctacaagcagacgcacgtcaagcaggccatc
gagggcgtgggcaacctgcggctgggctactggaaccagcagatggtgcccatcaaggag
atgaccgacgtgctcaaggtggtcaaggaggtgaccaacctcaaacccaaggcctgggtg
cgcctcaagaggggaatctacaaggatgacatcgcccaggtggattacgtggagcccagc
cagaaccagatctccctcaagatgatccccaggatcgacttcgaccgcatcaaagctcgc
atgagcctgaaggactggttcgccaagcgcaagaagttcaagcggccgccccagcgcctc
ttcgacgccgagaagatccggtccctgggcggggacgtggcgtccgacggtgacttcctg
atcttcgagggcaaccgctacagccggaagggtttcctgttcaagagctttgccatgtca
gccgtgatcaccgagggggtcaagcccaccctgtccgagctggagaagttcgaggaccaa
cccgagggcatcgacctggaggtggtgaccgagagcacggggaaggagcgggagcacaac
ctgcagccgggtgacaacgtggaggtgtgcgagggcgagctcatcaacctgcagggcaaa
atcctcagcgtggacggtaacaaggtgaccatcctgcccaagcacgaggacctcaaggac
atgctggagttcccggcgcaggagctgaggaaatatttccgcatgggcgaccacgtcaag
gtgatcgccgggagattcgagggggacaccgggctcatcgtcagggtggaggagaacttt
gtgatcctgttctcggacctgaccatgcacgagctgaaggtgctgccccgggatctgcag
ctctgctccgagacggcctcgggggtggatgttggggggcagcacgaatggggggagctg
gtgcagctggacccccaaactgtgggggtgattgtgaggctggagagggaaaccttccag
gtgctgaacatgtacgggaaggtggtgacggtgcgtcaccaggctgtcacccggaagaag
gacaatcgcttcgcggtggcgctggactcggagcagaacaacatccacgtcaaggacatc
gtcaaagtcatcgacggcccccactccggccgtgagggtgaaatccgccacctgttccgg
ggcttcgccttcctgcactgcaagaagctggtggagaacggggggatgttcgtgtgcaag
acgaggcacctggtgctggccgggggctccaagccccgcgacgtcaccaacttcgccatg
tgcggcttcgtgccgatgtcgccccgcatcagcagccccatgcaccccagcggggggggg
cagcggggtggattcggggccggggggctgagccggggccgcggccggcgcgacaacgac
ctcatcgggcagacggtgcgcatctcccagggaccctacaaaggttacatcggggtggtg
aaggacgccacggagtcgacggcgcgcgtggagctgcactcgacgtgtcagaccatctcc
gtggacaggcagcgcctgaccaccgtggggtcgcggcgccccgggggtctcacctcggcg
tacgggaggaccccgatgtacggctcgcagacccccatgtacggctcggggtcccgaacc
cccatgtacggctcacagaccccgctgcacgacggaagccgcaccccccactacggctcg
cagacccccctgcacgacgggagcagaaccccggcccagagcggggcctgggaccccaac
aaccccaacaccccctccagggcggacgaggatttcgagtacggctttgaggacgagccc
accccctccccccagggctacgggggtacccccaacccccagaccccggggtaccccgac
cctgcgtccccgcaagtcagccagccctacaacccccagaccccgggcacgcctgccatg
tacaacacggagcagttctcgccctatgccgtcccctccccccagggctcctaccagccc
agcccctccccccagagctaccaccaggtggccccgagccccgtgggctaccagaacacg
cactcgccggccagctaccaccccacgccctcccccatggcctaccaggtaccgccggac
cccagcccggtggggtacagccccatgacccccggggccccgtcccccggcgggtacaac
ccgcacacccccggctcggggatcgagcccagcgccggggactgggtgaccacggacatc
caggtgaaggtgcgcgagtcgtacctggacagcgccgccgtgggacagaccggggtcatc
cgcagcgtcacgggcgggatgtgctcggtgtacctgaaggacagcgagaaggtggtgagc
gtgtccagcgaacacctggagcccgtcacacccaccaagagcaacaaggtgaaggtgatc
ctgggcgaggaccgcgaggccaccgggatcctgctgagcatcgacggcgaggacgggatc
gtgcggatggacctggaggagcagctcaagatcctcaacctgcgcttcctggggaagctg
ctcgaggcctga
DBGET
integrated database retrieval system
