Pseudopodoces humilis (Tibetan ground-tit): 102099268
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Entry
102099268 CDS
T02921
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102099268 (SOX30)
Transcription factors [BR:
phi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102099268 (SOX30)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102099268
NCBI-ProteinID:
XP_005523822
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MERRVRHCRFRARGSPASPPRHREVVDHLGGLRVQVEEHPNRPGPSEGAAKKSRCISAQA
AVEKEAQSASRRERDHERGSGDRQNEEKVLEQTGNKTWRRATVQTERPNVTYEARPLKMD
KSDAPAASLCELGNPPQDQNIPVLFQPLPPRSQVQLQGPLPSQLMHVTPVPVNQVPVQLQ
PLLQRPKIDTRNVPLTVLPSDSGMPDTPFSKTKSGRVKRPMNAFMVWARIHRGPVAKANP
GANNAEISIQLGLEWSRLTEEQKQPYYEEANKIKMRHREEFPGWVYQPNKKKCSPPPGST
AFPGTSQSTMTTNPAGTLPFSSPTCSFVNSNVKNSIGHPVCESPAIHLPASSIQHAGPMT
VFQTTAASTTSVAVAVPTLPLRSGVSSQHFAEPAQTEAFVSPGLSFSLKRPAPVFAESFS
SRNPNNISSTSGRFSVSNSEIPGISGFPRGIALPQATPFIPSPAYVSAPVGQPANLFGGT
PQFPFCHPSFIPGPRCFPSSTFPLRAPFGYGNFSTSMPQCFGFYEERNQRQEVIFSTVDE
DYHLRAYSEERLHENQHVCGTPEIVPCQSTCSEERVLSPLPQLDVEVVEKVLPSPPSTPS
SSYIVNVTDSDEEEEVKFFQVL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcagggtcaggcactgccgcttccgcgcccgagggagccccgcctcgcccccc
aggcacagagaggtcgtggaccacctcggagggctgcgcgtccaagttgaggagcatccg
aaccggcccgggcccagcgaaggagcagcgaaaaagagcaggtgcatctcggctcaggcg
gcggttgagaaggaggcccagagtgctagcaggagagaaagggaccatgaaaggggcagc
ggtgaccgccagaacgaggagaaggtcctggaacaaactgggaataagacctggagaaga
gctacagtccaaacagagcgacccaatgtaacctatgaggcccgcccactgaagatggac
aagagcgatgccccggctgcatccttgtgcgagcttgggaaccctcctcaagatcagaat
attccggtcttgtttcagcccttacctcccaggtcccaagtacagctccaaggccctctg
ccctcgcagctgatgcatgtgactccagtgccggtaaaccaagtgccagttcaattgcag
cctctactgcagcggccaaagattgacacaagaaacgttcccctcacagttctgccctcg
gattcagggatgccagacactccattcagcaagaccaaaagtggccgtgtgaagcgtccc
atgaatgcattcatggtgtgggcccggatccacaggggtcctgtggccaaagccaaccca
ggtgccaacaatgcagaaatcagtattcagctcggcctggagtggagcagactcactgaa
gagcagaagcagccatactatgaggaagctaacaaaataaaaatgaggcacagggaggaa
tttcctggttgggtttatcagccgaacaaaaagaaatgttctccaccgcctggctctact
gcatttccgggcacttcccagagtaccatgactacaaatccagctggcacccttcccttc
tcatcacctacttgctcttttgtcaactccaatgttaagaacagtattggacatccagtc
tgtgaatctcctgccatccacctgccagcttcttccatccaacacgctgggcccatgact
gttttccagaccacagctgcaagcaccacatcagtggctgttgcagttccgaccttgccc
ctgcgctctggggtctcatcacagcactttgctgaacctgctcagacagaagcttttgtg
tcacctgggctcagtttctccctgaagagacctgcacctgttttcgctgagagcttcagc
agcagaaacccaaataatatcagcagcactagtggcaggttttctgtctcaaacagtgag
atccctgggatttctggttttcctagaggcatagctcttccccaggctaccccttttatt
ccttcacctgcctatgtgtctgctcccgttggacaaccagccaatttgtttggaggaact
cctcagtttccattttgccacccctcctttatacctggacctcgctgtttcccctcaagc
acattcccactcagagctccatttggctacgggaatttctccacctcaatgcctcagtgc
tttggcttttatgaagagaggaaccagaggcaggaggtgatattttccactgtggatgaa
gactatcatctcagggcatactcagaagagaggctacatgagaaccagcatgtctgtggg
acccctgaaattgttccctgtcagagcacctgcagtgaggagcgggttctgagccccctg
ccacagctggacgtggaagtggtagagaaggttttgccatcccctccatctactccttcc
agcagttacattgtcaatgtaactgacagtgatgaggaagaggaagtaaagttttttcaa
gtattgtaa
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