Pseudopodoces humilis (Tibetan ground-tit): 102099316
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Entry
102099316 CDS
T02921
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102099316 (VPS50)
Membrane trafficking [BR:
phi04131
]
Protein recycling
Others
EARP complex
102099316 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
102099316
NCBI-ProteinID:
XP_005518858
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVNDLSPIESFRVPTKEELRELHEEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQNGLQLAAVICTDGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAEVVSSV
SDGNNVIGTEENSFDRNYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFLEQSRSPSVSPSKQPASAISSTVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPIKSVSRETLKSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DMFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPSGTLAAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEEFNRRLSEVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMESWIKEHREYSTKQLTNLVNICLGTYINKKARQKLLATID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
aatgacctcagtcctattgaaagcttccgggttcctactaaggaggagctcagagaacta
catgaagaaccaactgatcctcaggcacaacaggaaataattaacagcattgaagaagtt
tatttttccaatgattcctttgatattgtgaaatatgagttagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaactaaaacaacagcaagctgctgta
tctaagaaagttgcagatttaatccttgagaaacagcctgcatatgttgaggaacttgaa
cgtgttacatcattgcagaatggccttcagttagcagcggttatctgcacggatggaaga
agacacctgaatatagcaaaggaaggcttcacacaaaccagtttggggctccttgcaaat
cagaggaaacgacagttgcttattggactgctgaagtctctgagaacaataaaaacactg
caaagaactgatgtacgtttgagtgagatgttggaggaagaggattatccaggagctatt
cagctgtgcttggaatgccagaaagccgccagcactttcaaacactacagttgtataagt
gagttaaattcaaaactgcaagacaccctggaacaaatagaggaacaattggatgtagca
ctttccaaaatatgcaagaattttgatatcaatcattatacaaaggttcaacaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcacccaagcc
attcacaacaccgtgtttcaagtggtccttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaaattacagtacaaagacctctgtacacatattacgtcagacagc
tacattccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
cggacaatgcagtggcatgagaaccatgaccaagatgaggcagaagttgtgtcttctgtt
tcagatggcaacaatgtgattggaactgaagagaacagctttgaccgcaactatgtgaaa
aagaaattggagcacgggctttcacgaatatggcaggatgttcagttgaaggtgaaaaca
tatcttctgggaacagatctgtctaacttcaaatacgatgacttcatatttgtacttgat
gttatcagcaggctgatgcaggttggagaagaattttgtggcagtaagtctgaagttttg
caggaatcaatcagaaaacaaagtgttaactatttcaagacatatcacagaacccgtctt
gaagaactaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagc
tttagtattttgcagcttcatgaatttaagttcttggagcagtcgcgttccccatcagtg
tcaccaagtaaacagcctgcctcagcaatttcatctacggtaacgctgtttgagcagtac
tgtaacggaggaaacccctttgaaattcaggctgacagcaaagatgatgagacagaagac
gtgttggcttccaatgggtatgaatcagatgaacaagaaaaaagtgcatatcaggagtat
gatagcgacagtgatgttcctgaagagttgaaaagagattatgtggatgagcagacagga
gatgccccgataaaaagtgtttctcgagaaactctgaagagcagaaagagatcagattat
aacctcaataaagtgaatgcacctattctaaccaacactacactgaatgtaataaggctt
gttgggaaatacatgcagatgatgaatattctgaaacctattgcatttgatgtgatccac
ttcatgtcccagctctttgattactatctgtatgcagtctatacattttttggccgaaat
gacatgtttgaatcaacaggactgggcctcagtagcagcagattacgcaccacactgaac
agaatccaggagagtctgattgatctggaggtatctgctgatccttcaggaactctcgca
gctgctgaagagagaaaagagaaggttccaagcccacatctcagtcatcttgtagttttg
acatctggcaattcactgtatggcttggcagagagagtggtggccacagaatccttggta
tttctggctgagcagtttgaatttcttcagcctcatctcgatgcagtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactgcgt
aaaccagtttattggattgttgctgctaaagccattgattatgaacaaatgcttcttctc
atggctaatgtgaaatgggatgtgaaggaaatcatgtcccagcacaacgtatatgtagat
gctcttttaaaggaatttgaggaatttaacaggaggttgagtgaagtgtctaagagagtc
cgtattccattaccagtctccaacatcctttgggagcactgcatacgcttggccaataga
actcttgtggaaggttatgccaatgtaaagaagtgtagcaatgaaggacgtgccttgatg
caactggattttcaacagttcttaatgaaactagaaaagttaacagacattaggcctatt
ccagataaagaatttgtggagacctacattaaagcatactacctgacagaaaatgacatg
gaatcctggataaaagaacatagggaatattccactaagcagttgaccaatctggtgaat
atttgtctgggcacctacatcaacaaaaaggcaagacagaagctgttagctaccattgat
gacatagacaggcctaagagataa
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