Pseudopodoces humilis (Tibetan ground-tit): 102099386
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Entry
102099386 CDS
T02921
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04136
Autophagy - other
phi04140
Autophagy - animal
phi04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
102099386 (ATG4C)
04140 Autophagy - animal
102099386 (ATG4C)
04136 Autophagy - other
102099386 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phi01002
]
102099386 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102099386 (ATG4C)
03029 Mitochondrial biogenesis [BR:
phi03029
]
102099386 (ATG4C)
Peptidases and inhibitors [BR:
phi01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
102099386 (ATG4C)
Membrane trafficking [BR:
phi04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102099386 (ATG4C)
Mitochondrial biogenesis [BR:
phi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102099386 (ATG4C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
102099386
NCBI-ProteinID:
XP_014106400
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MEATGTDEVEKIKSKFMSAWHNMKYSWVLKTKTYFSRNSPVFLLGKCYHFKTEESGELST
DGSNFDKINTEISGNVEEFRKDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQMLL
AQGLMLHFLGRAWVWPEALDMDSSDSESWTSSTVRKLTASFEASLTAERDPKILPQPQRG
PARRDWDVTEMRNEVYHRKIISWFGDSPLAAFGLHQLIEYGKKSGKMAGDWYGPAVVAHI
LRKAVEEARDPELQGVTVYVAQDCTVYSSDVIDRQCSFMDSGKAGTKAVIILVPVRLGGE
RTNTDYLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLESFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVK
GHSKDYDFVSSPLHEENDLFSEDEKKRLKRFSTEEFVLL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacggggacagatgaagtagaaaagatcaaatcaaagtttatgtctgcatgg
cacaacatgaaatacagttgggtgttgaaaacaaaaacttacttcagtaggaactctcca
gtctttctgctgggaaaatgttaccacttcaaaactgaggaatctggagagctctctaca
gatgggtccaattttgataaaatcaacactgagatttcggggaacgtcgaggagttccgc
aaagatttcatttctagaatctggctgacctacagagaggaattccctcagatcaaaggc
tctgctttaaccacagactgtggctggggctgcacgctcagaacggggcagatgctgctg
gctcagggtctgatgcttcacttccttgggagagcctgggtgtggccagaagctctggac
atggacagctctgactcagagtcctggaccagcagcactgtgaggaagctcacggcctcc
ttcgaggcgtcgctcacggccgagagggaccccaagatcctgccccagccccagcgcggc
ccagcgaggagggactgggatgtcaccgagatgaggaatgaagtttatcacaggaaaatc
atctcctggtttggtgactccccgctggcagcctttgggctgcaccagctgatagagtat
gggaagaaatccgggaagatggcaggggattggtacgggcccgctgtggttgcgcacatt
ttgagaaaagctgttgaagaagcgagagaccctgagctgcaaggagtaacagtctatgtt
gctcaggattgtacagtctacagctcggatgttattgacaggcagtgctcttttatggat
tctgggaaagcaggcacaaaagctgtaattatattggttcctgtgagactcggtggagag
agaacaaacacagactacttggagtttgtaaagggaattttaagcctggagtactgtgtt
ggcattattggtggcaaacccaagcagtcctattactttgctggattccaagatgacagt
ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc
cctcttgagtcattccactgtccttctccaaaaaagatgtcattcaaaaaaatggatccg
agctgcacaataggattttactgtaggactgtgcaggactttgagaaggcttctgaagaa
atcaccaagatgctgaaatcttcatccaaggagaaatatcccctgtttacttttgtcaag
ggtcattctaaagactatgactttgtttccagtccactccatgaagaaaatgaccttttc
tccgaggatgaaaagaaaagactaaagagatttagtacagaggagtttgtcttgctttaa
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