Pseudopodoces humilis (Tibetan ground-tit): 102099564
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Entry
102099564 CDS
T02921
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04137
Mitophagy - animal
phi04140
Autophagy - animal
phi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102099564 (HIF1A)
04137 Mitophagy - animal
102099564 (HIF1A)
04148 Efferocytosis
102099564 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102099564 (HIF1A)
Transcription factors [BR:
phi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102099564 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
102099564
NCBI-ProteinID:
XP_014105397
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MDSPGGVTDKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIM
RLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCM
GLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECM
LKPVESPDMKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDE
QQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNT
EPLELSFTIPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMASEFKLELVEKLFAI
DTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSSPSAGSVTIFQQS
QAAAGSAEEMKPAERADDVKTIIVPSSPVRGAAESSSAPASPYGGSRSRTASPIRAGKGT
ADQVEKPSPGAPSLLTVTLNKRSTALDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIGS
LFQQTGDGGGNASLAWKRVKGCKTNGHSGVEQKTIILLSTDIASKLLGQSMDESGLPQLT
SYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggacagccctggcggcgtcaccgacaagaagaggattagctctgaacgcaggaaagag
aagtcgagggatgcagcccggtgtcggaggagcaaggagtcagaagtgttctatgagctg
gctcaccagctgcccctgccccacaccgtgagcgcacacctggacaaggcgtccatcatg
aggctgaccatcagctacctgcgcatgaggaagctgctggatgctggtgagctggagaca
gaagccaaaatggagaaggaactgaactgtttctacttgaaagctcttgatggctttgtc
atggttctgtctgaagatggggacatgatttacatgtctgaaaacgtgaacaagtgtatg
ggactcactcagttcgagttgacggggcacagtgtatttgatttcactcatccgtgtgac
catgaggagctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagag
caaaacacggagcgcagcttttttctcagaatgaagtgtacactgactagcaggggaaga
acagtgaatataaagtctgctacatggaaggtgctgcactgcactggccacatccgtgtg
tacgacacgtgtgggaaccagactcactgcggatacaaaaagcctcccatgacctgcctg
gtgttgatctgtgaacctattcctcacccgtcaaacattgaggttcccctggacagtaaa
acgttcctcagtcgtcacagtcttgatatgaaattttcttattgtgatgaaagaattaca
gagttgatggggtacgagccagaggagctcctgggtcgctcaatctatgagtactatcac
gcactggattctgatcatctgaccaaaacacaccacgacatgttcacaaaagggcaggtg
acaacaggacagtacagaatgctggccaaacaaggtggctatgtctgggttgaaactcaa
gcaactgttatatacaacactaagaattctcagccacagtgcatagtgtgtgtgaactat
gtgttgagtggaattgttcagaaggacttaattttttcccttggacaaactgagtgtatg
ctgaaaccagtggagtctccggacatgaaaatgaccaaaatattcagtaaagatgacctg
gatgataccaacagcttatttgaaaaacttaaacaggaaccagatgctttaactgtgctg
gcccctgctgctggagacacaattatctctctagatttcagcagtaatgagtctgatgaa
caacaatgtgatgaagttcctttgtataacgatgtaatgctcccctcatccagtgagaaa
ttgcagaatataaatatggcaatgtccccactacctgcctctgaaaccacaaagccactt
cgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctggagccaaacaca
gagccactcgaactttcttttaccatacctcaggtgcaagagcaaccaaccagcccttct
gatgcaagtaccagccaaagttcacctgagcccagtagtcccaacgactactgctttgat
gtggataatgatatggccagcgaattcaaactggaattagtggagaaactctttgccata
gatacagaagcaaaaaatccattttctactcaggaaactgatttagatttagagatgctg
gctccttacatcccgatggatgacgacttccagctgcgctccttcgatcagctgtccccg
ctggaaagcagctcttccagctctccgagtgcaggcagcgtcaccatattccagcagagt
caggcagcggcgggcagcgctgaggagatgaagccggcggagcgcgcggacgatgtgaag
acgataattgtcccttcctcgcccgtgcgcggggccgccgagtccagcagtgcccccgcc
tcgccctacggcgggagcaggagtcgaactgcctctcccatcagggcagggaaaggaaca
gcggatcaggtggaaaaaccttccccaggagcacccagcttgctaacagtcactctgaat
aaaagatctactgcactggatgaagaactaaatccaaagatgctagctttgcataatgct
cagagaaaacgaaaaatggaacatgatggttcactttttcaggcagttggaattgggtct
ttattccagcagacaggtgacggtggaggaaatgcatcacttgcttggaaacgtgtaaag
ggatgcaaaacaaatggtcacagtggagtggagcaaaagacaatcattctactatcaact
gacatagcaagtaaacttctagggcagtcgatggatgagagtggactcccccaactcacg
agttacgactgtgaagtaaacgctcccatacaaggcaacagaaacctgctacagggggaa
gaactgctcagagctctggatcaagttaactga
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