Pseudopodoces humilis (Tibetan ground-tit): 102099702
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Entry
102099702 CDS
T02921
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phi03036
]
102099702 (TDRD12)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
102099702 (TDRD12)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102099702 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
T6PP_C
ERCC3_RAD25_C
EF-hand_3
Motif
Other DBs
NCBI-GeneID:
102099702
NCBI-ProteinID:
XP_005526459
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MEVVVLKVEDPSCFWIAVKDYVPGIVSETVYENLNAEMKQFYNSYRDADAIKQEEIEKGQ
VYVVFSEELKCWCRALVESVWCQADGYQLRCFLVDYAKYCSVASENIRVLVGAFAKIPHR
AKKCRLHCTKPLTLHIDYCENTAKIGPAKKWDTAAIQHFRKLLDEATEVKATIQAVEDEV
LEVFLFVTIRDEKICINDDLVAKHFAHYKEGEGTAESSTDDSDSEVSLNAECVPVEFVGP
TFLARPKLPFGDSMSPHLEPGLASCNSVLEKTSQRSHTVLNDSTVPVVSMVPDVPSKEDK
AVQTERLPQFLNSNSLQTHRVEDDQQSFQNIGKEKNFVFLSKKIEPSSVLETAPLFDGLK
KELASNKLSACTFTESYCWPPLARGFDVVAISHQGHDPLLYIPPVLTLLQLESDYQALPN
MSGPQALILCPGWKKAQLVFDLLKTYRKGCRRLHPMLIILGQNKEAARQVEIRSCEVVVT
TPYNFLRLLEHNTGLLCGLCHLVLDEIEVLFSDTTEQVFTILDCYKKATTQAQGNLPHQI
IAVGTRWNKHITPLIKEFMHDPHIVITVIEEAAIFGNVQQVVQPCMNRNRTAELLKILDF
TQRNLQKVLVFGDSVAEVEMIHKVLKSNSVVSLKKHKDSKCNAECVLERWRKMHRSGTQA
VLVLTDDCLQSLGITDATCVIHFSFPSPGVFGQRLQSMSDNFCSGIKDSAVDQEHMKAKS
VILLTESSSCHALGILRYLKHAEAEIPEELYDLTSRVLESEENEKFSRPLCVSLKTFGIC
RNRTECPDRHQINLSIDMAQNIADEMIETPERVTILPLFIVHATNYFGRIVRKQKDQYTV
LAKEINDYFKLPGHRISASTVEKSVFYGLCEGAICHRVQVVETPAKDEENVCKVTIKYID
EGRTSQVNSDQLLHLPAKFQSLPPQAVEIVVCRVKPIDNEVEWNPKVTDHINHKIKGKLH
HAKVMHTLGKTVWVDPMVGVTNLPTMKMWVNEYNIRSEILSTGLGTNNPEHIGEIQKLCR
QIPVLDHAESLEHLRTKPETAVEKFGTSVQALLVISTKEDTAGLEEASSPQETTSMQENS
AESCNSSVTPPSNNVVQTKEAEDSTVHQQKGYHPQIKWFQDNVTVTLKVQILRAADSKCE
FSREKVAFSAYSEGKLYVADLELYESVIAEKSTCVIKDTEAVILLVKEKKGVWCKLLKNK
NVHLSLDFEHWEESEDGRAFTVGSAKPGSYPPAGSEDWFESSEDSDTESDE
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgtggtattaaaggttgaagatccaagttgcttttggattgctgtgaaagac
tacgtgcctggcatagtcagtgaaactgtgtatgaaaatctgaatgctgaaatgaaacag
ttttataacagttacagagacgcagatgcaataaaacaagaggagatagaaaaaggccag
gtttatgtggttttcagtgaggaactcaagtgctggtgtagggcactggttgagtcagtg
tggtgccaggcagatggttaccagctcagatgtttccttgtggattatgccaagtactgt
tcagttgcatcagagaacattcgagttttagtaggagcgtttgcaaagatcccacataga
gcaaagaagtgtcggctgcactgcacaaagccactgacactgcatattgactactgtgaa
aacactgccaaaataggaccagccaaaaaatgggacactgctgctatccagcattttcga
aaacttcttgatgaggctaccgaggttaaagccacaatacaggcggtagaagatgaagtg
ttagaggtgtttctttttgtgactataagagatgaaaagatatgtattaatgatgatctg
gttgcaaagcactttgctcattacaaggaaggtgaagggactgcagagagttctacggat
gattctgacagtgaagtgtcgttaaatgctgagtgtgttccagtggagttcgttggtcct
acatttcttgccaggccgaaactgccctttggggactcgatgtcaccacatcttgagcca
ggtcttgctagttgtaattctgttcttgaaaagacgtcccaaaggtcacacacagttcta
aatgacagtactgtccctgtggttagcatggttccagatgtaccttccaaggaagataaa
gcagttcaaacagagaggcttccacagttcttaaattccaattccctccagacacacaga
gttgaagatgaccagcagagttttcaaaacattgggaaagaaaaaaactttgtgttcctg
agcaagaaaattgagccatcatcggttttggaaacagcaccactttttgatggtctgaaa
aaggaacttgcttcgaacaagctttcagcctgtaccttcactgagtcctactgttggcca
ccattagctcggggatttgatgttgttgccatctcccatcagggacatgatcccttatta
tatattccaccagttcttacacttctgcagttggaaagtgactaccaagccttgccaaac
atgagtggaccacaagcattgattttatgtcctggatggaagaaggcacaacttgttttt
gacctgctgaaaacatacaggaaaggctgcagacgccttcatccaatgctgataatcctt
gggcagaacaaggaagcagccagacaagtggaaatccgaagctgtgaagtggtagtgact
acaccatacaactttctgagactgctggaacataacactgggttattgtgtgggctttgc
catcttgttcttgatgagatcgaggtgctgttctctgacactactgaacaggtgttcact
atactggattgttacaagaaagccactactcaggcacaagggaatctaccacatcagatc
attgctgtgggaactcggtggaataagcacatcacacccttgataaaggagttcatgcat
gatcctcacattgtgataacagttatcgaagaagctgccatctttggaaatgtgcaacag
gtggtgcaaccctgcatgaaccgcaacagaactgctgagttactcaaaatcctggatttt
acccagaggaatcttcaaaaagtgctggtattcggtgactcagtagctgaagtagagatg
attcataaggtactgaagagcaactcagtagtttccttgaaaaagcataaagacagcaag
tgtaatgctgagtgtgtcttggagaggtggagaaaaatgcaccgttctggcactcaggct
gtgttagttttaacagatgactgcctgcagtccttgggaatcacagatgcaacttgtgtg
atccatttcagtttcccatctccaggagtctttgggcagcgcctgcaaagcatgagtgac
aacttctgctctgggataaaggattctgctgtagatcaggaacatatgaaagccaagtca
gtcattctgctgacagagagcagttcctgtcatgcacttgggattctccgctatttaaag
catgcagaagctgaaattccagaggaactctatgacttgacttccagggtgctggaatct
gaggaaaatgagaaattttcaaggcccctgtgtgtttctcttaaaacatttgggatctgc
aggaacagaacagagtgtccagatcgtcatcaaattaatttatcaatagacatggcccag
aatattgcagatgaaatgatagaaacacctgaacgtgtgacaatcctgcctctcttcatt
gtacatgcaacaaactactttggtcgaatagtcaggaaacaaaaggaccaatatacagtt
cttgctaaagaaataaatgattacttcaagctaccaggacataggatttctgctagcact
gtggagaagtcagtgttttatgggttatgtgagggagccatttgccacagggttcaggtg
gtagagactccagcaaaagatgaagaaaatgtctgtaaggtcacaattaaatatatagat
gaaggcaggacaagtcaagtgaatagtgatcagctgcttcacttacctgcaaagtttcag
agtctgccacctcaggctgtggaaattgtagtttgtagagtaaaacccatagataatgaa
gttgaatggaatccaaaggtgactgatcacattaatcacaaaattaaaggaaaacttcat
catgcgaaagtgatgcataccttgggaaagacagtttgggttgacccaatggttggggtt
accaatcttcccacaatgaagatgtgggtaaatgagtacaacattcgatctgagattttg
tcaacgggtttgggaaccaacaatcctgaacatataggagaaattcagaagttgtgcaga
cagataccagttttggatcatgcagagagcttggaacatttacgcactaagcctgagact
gctgttgaaaaatttggaacttcagtacaggctttgttagtaataagcacaaaagaggac
acagctggtctagaggaggcatccagtccacaggagacgacatcgatgcaggaaaattct
gctgaaagctgtaacagttctgtgactcctccaagcaataatgttgttcaaacaaaagaa
gcagaagactctactgtgcatcagcagaaaggctatcatccacaaatcaagtggtttcaa
gataatgtgactgtgacactgaaggtacaaatactgagggcagctgacagtaaatgtgag
ttctctagagagaaggtagctttcagtgcttattcagaaggcaaactttatgtggctgac
ctggagctgtatgagtcagtaattgccgagaagtccacatgtgtgattaaggatacagag
gctgtgattttactggtaaaagagaaaaaaggagtgtggtgcaaattactgaagaacaag
aatgttcacctgtccttagattttgaacattgggaagagtctgaagacggaagggctttt
acagttggctctgcaaaacctggaagctaccctcctgcaggatctgaggactggtttgag
tcctcagaagacagcgatacagaaagtgatgaataa
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