Pseudopodoces humilis (Tibetan ground-tit): 102099836
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Entry
102099836 CDS
T02921
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X2
KO
K17890
autophagy-related protein 16-1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04136
Autophagy - other
phi04140
Autophagy - animal
phi04145
Phagocytosis
phi04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
102099836 (ATG16L1)
04140 Autophagy - animal
102099836 (ATG16L1)
04136 Autophagy - other
102099836 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102099836 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102099836 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
phi03029
]
102099836 (ATG16L1)
Membrane trafficking [BR:
phi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
102099836 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
102099836 (ATG16L1)
Mitochondrial biogenesis [BR:
phi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102099836 (ATG16L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_EIPR1
CFAP251_N
eIF2A
Beta-prop_VPS8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Ge1_WD40
Tricorn_2nd
Beta-prop_WDR41
ZapB
INO80F
HEF_HK
HTH_6
DUF8181
PALB2_WD40
Peptidase_M15_4
Tricorn_N
DUF6383
CCDC93_CC
BEGAIN_coil
Motif
Other DBs
NCBI-GeneID:
102099836
NCBI-ProteinID:
XP_005529620
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MASGLRAAGFPPWKRHIAEELRRRDRLQRQAFEEIIAQYNKLLEKSDLHAVLADKLQAEK
YDMQSRHEISPGHDSTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DKEMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKL
RKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPDDDI
EVLADETSDTAEETSPARAVSRTSSKRLSQPAGGLLDSITNIFGLSESPLLGHQSSDTAR
RRSMSSFPAPQDNAEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRTESIVKELELLGRITALDLNPERTELLTCSRDDLLKIIDLRVSAVKQ
TFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYIWNVLTGKLERTLAKHHSSSINAVT
WSPAGAHVVTVDKGNKAVLWSEF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggctgcgcgctgccggcttccccccctggaagcggcacatcgcggaggag
ctgcggcggcgggaccggttgcagcggcaggctttcgaggagatcatcgcccagtataac
aagctactggagaagtcagaccttcatgctgtgctggctgataagcttcaagcagaaaaa
tatgacatgcagagcagacatgagatcagcccaggacatgatagcacatggaatgacgct
cagctacaggaactggcccagctgaagataaagcaccaagaggagctgactgagctgcac
aagaaacgtggagagctggcccagtctgtaatcgatctgaacaaccaaatgcagcagaag
gacaaagagatgcagatgaacgaagccaagattgcagagtatttgcaaaagatttctgaa
ctggaaacagagtgccaagaattgcgtagcaaactgcaggatcttgagcgagctaatcag
acactgaaagatgaatatgatgctctccagatcaccttcaatgccttggaggagaagtta
aggaaaactactgaagacaaccaggagctggtctcacgttggatggcagagaaagcacaa
gaagccaatcgtttgaatgcagaaaatgaaaaggattcaaggagacgccaagccaggctg
cagaaggagctggcagaagctgccaaagagcccttgcctgttgaaccggatgatgatatt
gaagtgcttgcagatgaaacctctgacacagctgaggaaacctctccagcgcgagctgtc
agccggacgtccagtaagcgactctcccagccagcaggaggccttctggactctatcact
aatatctttggtctgtctgagtctccccttttgggacatcagtcttctgatactgccagg
aggcgttctatgtcctcattccctgcaccccaggataatgcagagccacatccaggtgcc
agtaaagaagtgagagtgcccactactgccatatgtgtctttgatgcacatgatggggag
gtgaatgcggtgcagttcagccctggctcccggttactagcaacaggaggcatggaccgg
agggttaagctttgggaagtcttgggagataggtgtgagcccaaaggttccctctctggt
agtaatgctgggattacaagcatagaatttgatagtgctggttcttacctcttagcagct
tcaaatgactttgccagcagaatctggacagttgatgacaatcgattacggcacaccctg
acaggtcacagtggtaaagttctgtcagccaagttcttgctggacaatgcacgtattgtt
tcgggaagtcatgaccggaccctcaagctctgggatctccgcagcaaagtttgtataaaa
acagtttttgcaggatctagctgcaatgacatcgtgtgcactgagcagtgtgtaatgagt
ggacattttgataagaaaattcgtttctgggacatcaggactgaaagcatagtaaaagaa
ctggagttgcttggaagaatcacagctctggacctgaatccagagcgaacagagcttctg
acctgttcccgtgatgatctgctcaagatcattgatctgcgggtcagtgctgtcaagcag
acgttcagtgcccagggattcaaatgtggctctgactggacaagagttgtattcagccct
gatggtaactatgtggctgctggctcagctgatggggccctctacatttggaatgtgctt
actgggaaattggagaggacgcttgcaaagcatcacagttcttctatcaatgcagtcacg
tggtccccagcgggtgcccatgtggtcactgtggacaaaggaaacaaggctgtgctgtgg
tctgagttttga
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integrated database retrieval system
