Pseudopodoces humilis (Tibetan ground-tit): 102099954
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Entry
102099954 CDS
T02921
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03030
DNA replication
phi03420
Nucleotide excision repair
phi03430
Mismatch repair
phi03440
Homologous recombination
phi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102099954 (RPA1)
03420 Nucleotide excision repair
102099954 (RPA1)
03430 Mismatch repair
102099954 (RPA1)
03440 Homologous recombination
102099954 (RPA1)
03460 Fanconi anemia pathway
102099954 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102099954 (RPA1)
03032 DNA replication proteins [BR:
phi03032
]
102099954 (RPA1)
03400 DNA repair and recombination proteins [BR:
phi03400
]
102099954 (RPA1)
Transcription factors [BR:
phi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102099954 (RPA1)
DNA replication proteins [BR:
phi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
102099954 (RPA1)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
102099954 (RPA1)
MMR (mismatch excision repair)
102099954 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
102099954 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
IBR
Motif
Other DBs
NCBI-GeneID:
102099954
NCBI-ProteinID:
XP_005525848
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MSVRLSEGAIAAIMQGEEVSKPVLQVINTRAIATGTGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEERLSARCVCQVNRFIVNSLKDGRRVVILMDVNVLQTADQVDGPIGNPQPYNEG
QGQRSAAPAGNPAPSRPQQQNGNLSGAGPAAPKYHAPSNQFGKPSAPSAVKTPGGSQVKV
VPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSVELVDESGEIRATAFNDQADK
FFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVA
ISDLENTPKDSIVDVIGICKSYEDVTKITVKASNREVSKRNVHLMDTSGKLVTATLWGNE
AEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLEC
VSISDVRGGPAAGANTNWKTLFEAKSENLGQGDKADYFSCVGTIVHLRKENCMYQACPSQ
DCNKKVIDQQNGLYRCEKCDREFPNFKYRLMLLVTIADCLEYQWVTCFQDTAEFILGQNA
AFLGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAMDVKPVNYREYSK
RLIANIRRNAQLG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggctgagcgagggggccatcgcggccataatgcaaggggaggaagtctcc
aagcccgtgctgcaagtcattaatacacgggctattgccacaggaactgggcccccacgt
taccgagtgctgatgagtgatggggtgaacaccctctcctcattcatgctggcaacacag
ctgaactccctggtggaagaggaacgtttgtcagcccggtgtgtttgccaggttaacaga
ttcattgtcaacagcctgaaagatggaaggagagtggttatcctgatggatgtaaacgtc
ctgcaaactgctgatcaggttgatgggcctattggcaatccccagccgtacaatgaagga
caggggcaacgttctgcagctccagcaggaaacccagcacccagcagaccacagcaacaa
aatggcaatttgtctggagcaggtcctgctgctcccaagtaccacgctccctccaaccag
tttggaaaaccaagtgctcccagtgctgtgaagacacctgggggatctcaggtcaaagtg
gtgccaattgccagcttgaatccataccagtccaagtggaccatttgtgctcgtgttacc
caaaaaggtcagatccgcacgtggagcaactcccgtggtgaaggaaagctcttttccgta
gaactggttgatgaaagtggtgagattagagctactgcattcaacgatcaagcagacaag
ttctttccactcattgaattgaacaaggtatattattttaccaaaggcaatttgaagact
gctaacaagcaatatacagctgttaagaatgactatgagattacattcactaatgagact
tcagttgtgccctgtgatgatgcccagcatctcccatctgttcagtttgattttgtagcc
atctctgacttggagaacacacccaaagactcgattgttgatgtaattggaatttgcaag
agctacgaagatgtcactaaaattacagtgaaagctagcaatagggaggtttcaaagagg
aatgtgcatctgatggatacatcagggaaactggtgacagctacgctgtggggaaatgag
gctgaacagtttgatggttccagacaacctgtgattgccatcaaaggagcccgtgtctct
gactttggtggcagaagcctgtctgtcctgtcctccagcacagttgtcatcaaccctgat
agcccagaggctttcaagctccgaggatggtttgactccgaggggcagcttctggaatgt
gtctccatctctgatgtgaggggtgggccagcagctggagcaaataccaactggaaaact
ttgtttgaagccaaatctgagaacttgggacaaggagataaggcagattattttagctgt
gtgggcacaattgtacatctgcgcaaagagaactgcatgtaccaggcatgtccctctcag
gattgcaacaagaaagtgatagaccagcaaaatggactttaccgctgcgagaagtgtgac
cgcgaattccccaacttcaaataccgcctgatgctcctggtgaccattgcagactgtctg
gaatatcagtgggtgacttgttttcaagacacagcagaattcattcttgggcaaaatgca
gctttcctgggagaactgaaggaaaagaatgaacaggcttttgaagaagtgttccaaaat
gcaaactttaacacctacgagttcaggatccgagtgaaactggagacttacaacgacgaa
tctcgtattaaggccacagcaatggacgtcaaacccgtgaactacagagaatacagcaag
aggttgattgccaacatcaggagaaatgctcagctggggtga
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integrated database retrieval system
