Pseudopodoces humilis (Tibetan ground-tit): 102100024
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Entry
102100024 CDS
T02921
Name
(RefSeq) uncharacterized protein C9orf84 homolog
KO
K28108
shortage in chiasmata 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phi03036
]
102100024
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Meiosis-specific proteins
Others
102100024
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHOC1_ATPase
SHOC1_PDDEXK
SHOC1_HhH_tandem
SHOC1_2HhH
Motif
Other DBs
NCBI-GeneID:
102100024
NCBI-ProteinID:
XP_005530837
LinkDB
All DBs
Position
Unknown
AA seq
1459 aa
AA seq
DB search
MLKTSQNKMFAALKYHSTDYLYESMARQKFSIWKLSLCFPPCLHQDEKYHLNGLFADDKY
RKPWTRIGSTQNMIAISVLDQWKKSLLVEDFLEKKPISSVEFQASNDLIEVIPSSNPCSQ
TGTEECFLLTKNGFKGDSTQDKYLKIYYATEFKDPQQDLCLEEEFVFIDNLENFRRKLPT
LSILLSRLQFFLVKDPLLDSEGQILRAENIFRECLTSQNEIKMEESQNELQGIKENFCTV
SIKDEEYFLLPAELEFGKPSNGRSDCVKIPSYLQLKEVLNLTPVTVDDEDPCKQVIREDL
KAAITYKIEISKYCAIPQEVCSSISTSMLEFCESVEYIPYLKDEMEMPLTPPCRQQRSWV
NFLCRGLQEEPISLSGNSILIAEPSREFLESLVWQSEKYRDNMSSLLLVEHPDVNLAHQH
HSLTELQKKLPVEIEAPMLGSLEEGWWLHTGLSPAAVEILEQFNMDGSNANSLLPTEIET
FTKFTLYQLERWLEEKNSVTNQELLSAERHQSEKVVNPDLSLQIQRQYFVTSAVSSANIH
STNTSVEELTGGSIRKIKTEEAICFLNQEKKIPKPSESESCKDASSKLDKSSCSGKPASL
ALASKWANDDSDLNNFIMMRSKHIVTLREEKHYVDRHENVVQPEEQHMCVHKDDDSFCET
VKTEERSPENEDSITVNIQPSESQFQAFCLLEEAAIPVLKDLTHLGVLASVTWSFDSVKF
DHTRFFLKQQEKVICDNFQQGKIDEKEIMLFRHAALVHLLVTVRDLLLTCDLDTALGYLS
KAKDIYKNILESCLNNIWRQLKIIQYSSQKKHETHPKITALQCEMLNWMKSYGEKQSVKI
LIITRMDSEKAAFIHSLSGIEGLKVVDLNSEKKGSPLSCKEIISNRYSCVIVHNQQIGAD
FPWTHFSLVMEYDYSENSGWKNLCKNLSVTYMTFKTTLPGTIQMRNHGGSFLLEVQIPYV
FLTTEGLLNMPDILQLFESKYSITFVERSSSYSLRLFGSVDRYVVLTIDEGTAIFLQSME
ELNYEDSCDAVISRLMALSLQYMCCWIIFYSRERLSSEYSLKGNTLLNLVLIYATLIELT
QKSEDFEVKVILTPGIEETALVIRQIADNILIASNISPHEWLDKSWLSVLPSETEKCLLT
FPCINPLVAQFMLKKWSSLNRLFLASFDQLQELLPEVPKKVLKHFSDMVSSYSLNTAAPL
EKTVKSASHPENQNNFNTLYLDNKQNCQILELLDKAQNNTGMSHMNFEPLIPPLNHRKGV
LNSDLPSCMRKKACLSDVITRRKPDFIAVSKDYEDFAHLEVKNSLHVQRQPFRMHDSSDN
SSKDTEKEDFFGTFSDCVPQESFKSFLEEFTDTTCNSPEIQIAQPLWNDSLSTSPHNSFA
HDDFLSDFFDGMDKLPNLNFNQIGRAPKGKRKQRPPFFWTKENIKTDSGFPEVQEFKKRK
LTYERVPGRRDGQTRLKFF
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaacatcacaaaacaagatgtttgcggctttgaagtatcactcaacagactat
ttatatgagagcatggcaaggcagaagttttccatctggaaattatcactttgctttcct
ccctgtttacatcaagatgaaaagtatcatctcaatggactctttgctgatgataagtat
aggaagccatggactagaattggttcaacacagaacatgattgctatttcagtattggat
caatggaagaaaagtttacttgtggaggatttcctggaaaagaaacctatctcctctgta
gagtttcaggctagcaatgatttaatagaagttattccaagctcaaatccttgctctcag
actggcacagaagagtgttttttacttacgaagaatggttttaagggagactccacccaa
gacaaatatttgaagatttactatgccactgaatttaaagacccacagcaagatttatgt
ttggaagaggagtttgtttttattgataatctggaaaattttcgtagaaaactgccaaca
ttatctatacttctgagcagactacagttttttttagtgaaagatccccttttagattct
gaaggacagattttaagagcagagaatattttcagggaatgtttgacttcccaaaatgaa
attaagatggaagagagtcaaaatgaattgcaggggattaaggagaatttctgtactgta
tctataaaagatgaagagtatttcctgttacctgctgaattagaatttggcaaacccagc
aatggcagatctgattgtgttaagattccatcatacttgcaactgaaagaggtgttaaat
ttaactccagtcactgtagatgatgaagacccttgcaaacaggtgatcagagaagatctc
aaagcagcaattacatacaaaatagaaatttccaagtactgtgccattccacaagaggtt
tgctccagtattagcacaagtatgttggaattctgtgagtcagttgaatatattccatat
ttgaaagatgaaatggaaatgcctttaactcctccatgcagacaacaaagatcatgggtt
aattttctgtgcagaggacttcaagaagaacctatttctctctctggtaacagtattttg
attgcagagccctctagggaattcttagaatctttggtttggcaatcagagaagtatcgg
gataatatgagctctcttttgcttgttgagcacccagatgttaaccttgcacatcagcat
cattcactgactgaactacagaaaaagctgccagttgagatcgaagcaccaatgcttgga
tcactagaggagggctggtggcttcatacgggtttaagtccagcagctgtagaaattttg
gaacaatttaatatggatggaagcaatgcaaacagtctacttcctacagaaatagaaaca
ttcacaaaatttacattgtatcaattagaaagatggcttgaagagaagaattctgttaca
aaccaagagctgctgtctgctgaaagacatcagtcagagaaagtagttaaccctgacctg
tcactgcagattcaaaggcagtactttgtcacaagtgctgtatcatctgccaacattcac
agtacaaatacatctgtggaagagcttactggaggaagcataagaaagattaagacagaa
gaggcaatttgtttcttaaaccaagaaaagaaaatccccaaaccatctgaatcagagagc
tgtaaagatgcgtcttccaaactagacaaatcatcctgtagtggaaagcctgcatcactt
gcacttgcttctaaatgggccaacgatgattctgatttgaacaactttattatgatgaga
tctaagcatatagtcaccctaagagaagaaaaacattatgtagatagacatgaaaatgtg
gtacagcctgaagagcagcatatgtgtgttcacaaagatgatgattctttttgtgagact
gtaaaaacagaggaaagatctccagagaatgaagacagtatcactgtcaatattcaacca
tcagaaagccaattccaggcattttgcctcttggaagaagcagccatccctgtattaaag
gatttgacacatctgggtgtacttgcttctgttacttggagctttgacagtgttaaattt
gatcatacaaggtttttcttaaaacagcaagagaaagtgatatgtgataattttcaacaa
ggtaaaatagatgagaaggaaatcatgctgttcagacatgctgctctggtacacctgctg
gtgacagttcgagatttgctactaacttgtgacttggatacagctctaggttatttgtcc
aaggcaaaggatatctataaaaacattttagaatcctgtttgaataatatctggaggcag
ttgaagattatacagtacagcagccagaaaaagcatgaaactcatcccaaaataacagca
cttcagtgtgaaatgttaaattggatgaaaagttatggagagaaacagagtgttaagata
cttatcattacaaggatggactctgaaaaagctgccttcattcactcattatctgggata
gaaggtttgaaagttgtggatttgaattctgagaagaaaggaagccctttaagttgtaaa
gagataataagcaatagatattcctgtgttattgtacataatcagcaaattggagctgac
ttcccttggacacacttctcattagtaatggaatatgattattctgaaaattctggctgg
aaaaatctgtgcaaaaatctgagtgttacttacatgacttttaaaaccaccctccctgga
acaatacaaatgcggaatcatggtggttcctttcttctggaagtacagattccatatgta
tttctgacaactgaaggtcttcttaatatgccagatattcttcagctttttgaatccaag
tacagcattacctttgttgaaagaagcagtagttactccttaaggctttttggaagtgta
gatcgttacgttgtattgacaatagatgaaggtactgctatctttttacagagtatggaa
gaactaaattatgaggactcttgtgacgctgtaatatcgagactgatggcattatcactc
caatatatgtgctgttggattattttctattccagagaaagactgagttcagagtacagt
ctcaagggaaatactctgcttaatcttgtcttaatttatgccaccctaattgaacttaca
cagaagtcagaagactttgaagtgaaggtaattcttactccagggatcgaagagacagca
ctggtaattcgtcagattgctgacaacattttgatagcatctaatatcagtcctcatgag
tggctggacaaatcctggctttcggtcttgccatctgagacagagaaatgcttgcttact
tttccatgtatcaatcctttggttgctcagtttatgttaaagaagtggtcttcactgaac
aggttatttcttgcaagctttgatcaactccaggaacttctgccagaggttccaaaaaaa
gttttaaagcatttcagtgacatggtatcttcatacagcctaaatactgctgctcctcta
gaaaaaacagtgaaaagtgcatcacacccagaaaaccagaataatttcaacacattgtat
cttgacaataaacaaaattgtcagattttagagctgcttgataaggctcaaaacaacaca
ggaatgtctcatatgaattttgagcccctaattcctccactgaatcatcgtaagggtgtt
ttaaattctgatcttccaagttgtatgcgaaagaaagcatgcttatcagatgtaattaca
aggaggaagccagatttcattgctgtgtcaaaggactatgaagattttgctcatctagaa
gttaaaaattctctccatgttcaaagacagcctttcaggatgcatgatagctctgataat
tcttccaaagacactgaaaaagaggatttctttggaactttcagtgactgtgtacctcag
gagagttttaagagttttctagaagaatttacagacacaacatgtaacagcccagaaatt
caaattgcccagcctctgtggaatgactctttatccacaagcccacataattcatttgca
catgatgattttctctctgatttctttgatggtatggataagcttccaaatctgaatttt
aaccaaataggtagagcacctaaaggaaagagaaaacaaaggcctccattcttctggacc
aaagaaaatattaaaacagattcaggatttccagaagtacaggagttcaaaaaaaggaaa
ttgacatatgaaagagtccctggaagaagagatggacaaacacgtcttaaattcttttga
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integrated database retrieval system
