Pseudopodoces humilis (Tibetan ground-tit): 102100060
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Entry
102100060 CDS
T02921
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102100060 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
phi01001
]
102100060 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
phi04054
]
102100060 (CIITA)
Enzymes [BR:
phi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102100060 (CIITA)
Protein kinases [BR:
phi01001
]
Serine/threonine kinases: Other
TAF1 family
102100060 (CIITA)
Pattern recognition receptors [BR:
phi04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102100060 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
NB-ARC
nSTAND_NTPase5
RsgA_GTPase
NPHP3_N
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
102100060
NCBI-ProteinID:
XP_014107876
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MASVLVFVISSFLLSLSVSPWQGWQLSFFGTESRVKQQELKTKRQTMDSVFVPENGYLDL
LHSDIDPLHLCTFFDPKLPGDEEGDFSTDLEVDASNYEQLNNVDFPYENGDGFYPCSNTM
DAYAKIAELVEYVLKDQQEKQVEDIFAGNLILDDIAAENTEKFPDIKMQTCLKRTFLGSA
AEGYCDVSEPKYKKIAEAPAVSAGNGSFFAMPLNSHPVSCTSLTNQHMSFSAPAAHGLER
NLIIPGLSEPLTSECLPASVKEYQENQNLASAPQQIFNFVLENSTSDVIVYPVLASSMET
FMSPNFPVNLCAQQTYATSPGIPDAAADELAYLETFQEDSIIPSEEPFKRPEQVETFCSS
LKDYFRDTCKSVTMEREVNLDHLFIDGTLVQTQTETKTGKNSAKAMEKELVTCSLQEKEK
TAIDRSQIFQIPQRKDLETKVIVVLGKAGMGKSILVQKICQDWSSGEFSQFEFVFWFDCK
QISLPEKRYSLKELLLEFFVKPQEGSKEIFEYILQNPAKVLLIFDGFKGLHDHENFPRCS
ASQPEKDLCSTKELLSGLIQKKLLNGCTLLFTARPKDKLYQYASKVDKTIEIVGFSSQQR
ELYITKYFEESPYCDSALKLIKEHEYLFSHCYSPVMCRFVCFLCEAVLEMGEKSLPSTLT
EVFLKFFKQKIMLMQTDVTTTQNQESLATLARIAWCLGEKHQSAMKSDLLPSKEVKEFAL
KYGFVLPFAFPRHSDSEEEEFGSTFSDFVIQNFLCALHLLLAEELKDKNLTKYLSFLSKK
KKPYNWLDLMPRFLVGLMFLQDDLYLGSLSNVDAKQSTKKQKTLLKYIRRLQINTLCPER
LLELFHCVYETQNNYLLQHVALRLEPDLSFLGIVLIPPDVYVLLSILKRSRKEFSLDLRN
SSIDMQGLQALVSLRNVTSFRASLSDTVRLWKSLEQTKEYELLKASTEKFVLDPFKAKTM
KDISDLSDLVEMQKMMNCAQEASGCTSYEIPAIRNLRKLEFALGPAFGLQGLLKLVKILA
AFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDLGAENLATALPS
LSSLKTLSLYNNNICDFGAENLAKALPAMTSLRVLDVQYNKITGVGAQQLTDSLRKCPHI
KNLVMWNPTIPYGVLEHLHQLDSRISV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgttctggtgtttgttatttcctcctttctgctgtcactttctgttagccct
tggcagggctggcagttatcattttttggtactgaatccagagtgaaacagcaggaactt
aagacaaagagacaaaccatggattcagtatttgtgcctgaaaatggctaccttgattta
ctgcacagtgatattgatccattgcatctgtgtactttctttgatcctaagttacctgga
gatgaagaaggtgacttctctacagatcttgaagttgatgccagcaactatgaacagtta
aataatgtggatttcccatatgaaaatggagatggcttctacccctgttccaacaccatg
gatgcttatgctaaaatcgctgaattagtagaatatgtgctcaaggatcagcaggagaag
caggtcgaagacatttttgcagggaaccttattttggatgacattgctgctgaaaacact
gagaaatttcctgacataaagatgcagacatgtcttaaacgaactttcttaggctctgca
gcagagggttactgtgatgtttcagaacccaaatataagaaaattgcagaagcccctgca
gtgtctgcagggaatggcagtttctttgctatgcctctcaacagccacccagtgagctgc
acctccctaactaaccagcacatgtccttttctgctcctgctgcccatgggctggaaaga
aacctcataattcctggattgtcagaacctttgacctcagagtgtctaccagccagtgtg
aaggagtaccaagagaatcaaaacttggcaagtgctcctcagcagatatttaactttgtt
cttgaaaatagcacatctgatgttatagtatatccagtgctggcatcttctatggaaaca
ttcatgtctccaaattttccagttaatttatgtgcacaacaaacgtatgccacaagcccc
ggaattccagatgcagcagcagacgaattagcatatttagagacatttcaagaagattcc
ataattccttctgaagaacctttcaaaagaccagagcaagtggaaaccttctgttcgtca
cttaaagattatttccgagacacgtgcaaatctgtgaccatggagcgggaagtaaatctg
gatcacctgttcattgatgggacacttgttcaaactcaaactgaaacaaagactggaaag
aatagtgcaaaagcaatggaaaaggagctggtaacctgcagcctgcaagagaaggaaaag
acagccattgatagaagccagatatttcaaatcccacaacgtaaagacttagagactaaa
gtgattgtggttctgggtaaagcaggaatgggcaaaagcattctggttcagaagatctgc
caggactggtccagtggagagttttctcagtttgaatttgtattttggtttgactgcaaa
caaataagcttgcctgagaaacgatacagcctgaaggaactgctgcttgaattttttgta
aaacctcaagagggaagcaaagagatctttgagtatatattgcaaaatcctgctaaagtc
cttctgatttttgatgggtttaaaggattgcatgatcatgagaattttcctcgctgctca
gccagccagcctgaaaaggatttgtgcagtacaaaggagctgctttcaggactcatccaa
aagaagttactcaatggttgtactttattatttacagcaagaccaaaagacaaactgtac
cagtatgcatccaaagtggataagactattgaaatagtaggattttcctctcagcagaga
gaattgtacataaccaaatattttgaagaatcaccctactgtgatagtgcactgaaatta
atcaaagagcatgagtacttgttcagtcattgttacagccctgttatgtgtagatttgtt
tgttttctctgtgaggcagtgcttgaaatgggggagaaaagtcttccttcaactcttact
gaagtcttcctaaaattttttaagcagaagataatgcttatgcaaacagatgttacaacc
acacaaaatcaagagagtcttgctaccctagcccgtatagcctggtgtcttggagaaaag
caccaaagtgccatgaaaagtgatcttcttccttctaaggaagttaaagagtttgctctg
aagtatgggtttgtcctgccatttgcatttcccagacattcagatagtgaagaagaggaa
tttgggagcacattctctgattttgtcattcagaatttcttgtgtgcactccaccttttg
ttagcagaagaactcaaggataaaaatctaacaaagtacctgtcttttctatccaagaag
aaaaaaccttataactggttagatttgatgcctcgatttttggttggtttgatgtttctc
caggatgacctctatttgggctctctttcaaatgtggatgcaaaacagtcaaccaagaaa
cagaagacactcttgaaatacattagaaggctgcagattaatactctctgtccagagagg
ctgctggagctttttcattgtgtttatgaaacacagaacaattaccttctgcagcatgtg
gccttaagactcgaaccagacttgtcttttctgggcatagttcttataccacctgatgtc
tatgtactgctctctattttgaaaaggtcaagaaaagagttttccttggatttgcgaaac
agcagcattgacatgcaagggctgcaagccttggtcagcctaaggaacgtgacatcattc
agggcttccctcagtgacacagtcaggctctggaaatctttagaacagacaaaagaatat
gaactgctgaaagcatccacagaaaaatttgttcttgatccctttaaggcaaagacaatg
aaggacatcagcgacctctctgaccttgtagagatgcagaagatgatgaattgtgctcaa
gaagcatctggttgcaccagctatgaaattcctgccattagaaacctcagaaaactcgaa
tttgcgctgggtccagcatttggcctccaaggattgctaaaactcgtgaaaattctcgca
gcatttccatcacttcagcatttagaccttgatgctctgagtgaaaatggcataggagat
gaaggagcaaagagtctatctgaagtctttccaaccctgacatcactggaaacattaaat
ttatcacagaataaaataacagatctgggtgcagagaacctcgctaccgctctcccttcc
ttgtcttccttaaaaacactaagcttgtacaataataacatttgtgattttggagcagaa
aatctggcaaaggctcttcctgcaatgacatctttaagagtgctagatgttcagtataac
aaaataactggtgttggagcccagcagctgacggacagcctacgaaaatgtccccatata
aagaacttggtgatgtggaatcccaccattccctatggagttcttgaacaccttcaccag
ctggactccaggatcagtgtgtag
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integrated database retrieval system
