Pseudopodoces humilis (Tibetan ground-tit): 102100124
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Entry
102100124 CDS
T02921
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04512
ECM-receptor interaction
phi04514
Cell adhesion molecule (CAM) interaction
phi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102100124 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
102100124 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102100124 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102100124 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
phi04090
]
102100124 (SDC1)
00535 Proteoglycans [BR:
phi00535
]
102100124 (SDC1)
Membrane trafficking [BR:
phi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
102100124 (SDC1)
CD molecules [BR:
phi04090
]
Proteins
102100124 (SDC1)
Proteoglycans [BR:
phi00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
102100124 (SDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Glycophorin_A
Band_3_cyto
Motif
Other DBs
NCBI-GeneID:
102100124
NCBI-ProteinID:
XP_014106969
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MISVVAVWLVALCFQAAVPQTTNLNLPPEDLDSSGDEDDAFSGSGAGPLTDQSHTWRIPG
DSTNSSVLVAPVDFSEQPFPGIESRTEKEVISPSATSNLVTEEPVVAVKDEIPLLGSPDG
KPTSHIVTTTVRTPTAHFPSVVHVTPSEASAVVHEPKIPSSDVPDSKDVPEPHSTVHPEG
DSAATPAATAPKDIVPTHEEVSEDGSGDPGDFILTKEEDFVPTQNSEVLPDSERNAKAAG
ASGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQKPH
KQEEFYA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgataagcgtggtggccgtgtggctggtggccctttgcttccaggctgctgtcccgcaa
actacaaatctgaaccttccccctgaagaccttgattcttctggtgatgaagacgacgcg
ttctcaggttcaggtgcaggtcccttgactgaccagtctcacacctggagaatcccagga
gactcaactaattcctcagtactggtagcaccagtggatttcagtgaacagccatttcct
gggattgagagcagaactgaaaaggaagtaatatctccttctgcaaccagtaacctagtg
acagaggaaccagttgtagctgtgaaggatgaaatacccctcctgggctcacctgatggg
aaaccaacaagccacatagtcacaacaacagtgagaactcccactgctcacttcccttct
gtggttcatgtgactccttcagaagcctctgctgtggtccatgaacccaaaatccccagc
tctgatgtgccagacagcaaggacgtgccagagccccattctactgtccatcctgaggga
gacagcgctgccacccctgcggccacagctccaaaggatatcgttcctacacatgaggag
gtttctgaagatggctctggagacccgggagacttcatcttgactaaagaagaggatttt
gtccccacgcagaactcagaagtgctgcctgactctgagaggaatgccaaagcagcagga
gcctcgggaattatggacagaaaagaagttcttggaggtgttattgctggaggacttgta
ggcttggtgtttgcagtgtttctagttgcatttatgctgtacagaatgaagaaaaaagat
gaaggcagctattcactggatgaaccaaaacagtctaatggaggataccaaaaaccacac
aaacaagaggaattctatgcataa
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integrated database retrieval system
